RNA–Protein interactions for RNA: ENST00000514292.5

PACRGL-230, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-230ENST00000514292 NISCHQ9Y2I1 1504 aa42.88■■■■■ 4.46
PACRGL-230ENST00000514292 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.67
PACRGL-230ENST00000514292 ABCC9O60706 1549 aa36.88■■■■□ 3.49
PACRGL-230ENST00000514292 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
PACRGL-230ENST00000514292 NACADO15069 1562 aa35.72■■■■□ 3.31
PACRGL-230ENST00000514292 DCAF8L2P0C7V8 631 aa35.67■■■■□ 3.3
PACRGL-230ENST00000514292 RB1CC1Q8TDY2 1594 aa35.67■■■■□ 3.3
PACRGL-230ENST00000514292 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
PACRGL-230ENST00000514292 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.29
PACRGL-230ENST00000514292 UNC13AQ9UPW8 1703 aa34.76■■■■□ 3.16
PACRGL-230ENST00000514292 SCRIBQ14160 1630 aa34.59■■■■□ 3.13
PACRGL-230ENST00000514292 BICRAQ9NZM4 1560 aa34.54■■■■□ 3.12
PACRGL-230ENST00000514292 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
PACRGL-230ENST00000514292 SHROOM4Q9ULL8 1493 aa34.33■■■■□ 3.09
PACRGL-230ENST00000514292 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
PACRGL-230ENST00000514292 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
PACRGL-230ENST00000514292 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
PACRGL-230ENST00000514292 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
PACRGL-230ENST00000514292 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
PACRGL-230ENST00000514292 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
PACRGL-230ENST00000514292 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
PACRGL-230ENST00000514292 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
PACRGL-230ENST00000514292 ATAD2BQ9ULI0 1458 aa32.99■■■□□ 2.87
PACRGL-230ENST00000514292 SMARCA2P51531 1590 aa32.97■■■□□ 2.87
PACRGL-230ENST00000514292 PEG3Q9GZU2 1588 aa32.93■■■□□ 2.86
PACRGL-230ENST00000514292 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
PACRGL-230ENST00000514292 RSF1Q96T23 1441 aaPredicted RBP32.76■■■□□ 2.83
PACRGL-230ENST00000514292 BAZ1BQ9UIG0 1483 aaKnown RBP32.7■■■□□ 2.83
PACRGL-230ENST00000514292 WIZO95785 1651 aa32.62■■■□□ 2.81
PACRGL-230ENST00000514292 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
PACRGL-230ENST00000514292 SUPT5HO00267 1087 aaKnown RBP32.04■■■□□ 2.72
PACRGL-230ENST00000514292 LAMC3Q9Y6N6 1575 aa32.03■■■□□ 2.72
PACRGL-230ENST00000514292 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
PACRGL-230ENST00000514292 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
PACRGL-230ENST00000514292 NESP48681 1621 aa31.98■■■□□ 2.71
PACRGL-230ENST00000514292 CFTRP13569 1480 aa31.87■■■□□ 2.69
PACRGL-230ENST00000514292 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
PACRGL-230ENST00000514292 ERCC6Q03468 1493 aa31.79■■■□□ 2.68
PACRGL-230ENST00000514292 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
PACRGL-230ENST00000514292 KIF21AQ7Z4S6 1674 aa31.59■■■□□ 2.65
PACRGL-230ENST00000514292 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
PACRGL-230ENST00000514292 CEP164Q9UPV0 1460 aa31.53■■■□□ 2.64
PACRGL-230ENST00000514292 THOC2Q8NI27 1593 aaKnown RBP31.46■■■□□ 2.63
PACRGL-230ENST00000514292 CUX2O14529 1486 aa31.46■■■□□ 2.63
PACRGL-230ENST00000514292 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
PACRGL-230ENST00000514292 WDR62O43379 1518 aa31.33■■■□□ 2.61
PACRGL-230ENST00000514292 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
PACRGL-230ENST00000514292 ABCC8Q09428 1581 aa31.23■■■□□ 2.59
PACRGL-230ENST00000514292 TOPBP1Q92547 1522 aa31.12■■■□□ 2.57
PACRGL-230ENST00000514292 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
PACRGL-230ENST00000514292 CUX1P39880 1505 aa30.95■■■□□ 2.55
PACRGL-230ENST00000514292 IFT140Q96RY7 1462 aa30.89■■■□□ 2.54
PACRGL-230ENST00000514292 WRNQ14191 1432 aaPredicted RBP eCLIP30.88■■■□□ 2.53
PACRGL-230ENST00000514292 POLA1P09884 1462 aaPredicted RBP30.86■■■□□ 2.53
PACRGL-230ENST00000514292 FGD5Q6ZNL6 1462 aa30.8■■■□□ 2.52
PACRGL-230ENST00000514292 SOGA1O94964 1423 aa30.79■■■□□ 2.52
PACRGL-230ENST00000514292 TOP2BQ02880 1626 aa30.77■■■□□ 2.52
PACRGL-230ENST00000514292 TARBP1Q13395 1621 aaKnown RBP30.75■■■□□ 2.51
PACRGL-230ENST00000514292 BIVM-ERCC5R4GMW8 1640 aa30.75■■■□□ 2.51
PACRGL-230ENST00000514292 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
PACRGL-230ENST00000514292 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.5
PACRGL-230ENST00000514292 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
PACRGL-230ENST00000514292 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
PACRGL-230ENST00000514292 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.49
PACRGL-230ENST00000514292 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.48
PACRGL-230ENST00000514292 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
PACRGL-230ENST00000514292 EIF4G3O43432 1585 aaKnown RBP30.53■■■□□ 2.48
PACRGL-230ENST00000514292 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
PACRGL-230ENST00000514292 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
PACRGL-230ENST00000514292 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
PACRGL-230ENST00000514292 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
PACRGL-230ENST00000514292 MAGI1Q96QZ7 1491 aaPredicted RBP30.29■■■□□ 2.44
PACRGL-230ENST00000514292 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
PACRGL-230ENST00000514292 KIF27Q86VH2 1401 aa30.24■■■□□ 2.43
PACRGL-230ENST00000514292 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
PACRGL-230ENST00000514292 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
PACRGL-230ENST00000514292 OSCARQ8IYS5 282 aa30.23■■■□□ 2.43
PACRGL-230ENST00000514292 ERICH3Q5RHP9 1530 aa30.22■■■□□ 2.43
PACRGL-230ENST00000514292 SYNJ2O15056 1496 aa30.16■■■□□ 2.42
PACRGL-230ENST00000514292 CHMP7Q8WUX9 453 aaPredicted RBP30.14■■■□□ 2.42
PACRGL-230ENST00000514292 FBLN2P98095 1184 aa30.12■■■□□ 2.41
PACRGL-230ENST00000514292 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
PACRGL-230ENST00000514292 IGF1RP08069 1367 aa30.11■■■□□ 2.41
PACRGL-230ENST00000514292 FHAD1B1AJZ9 1412 aa30.09■■■□□ 2.41
PACRGL-230ENST00000514292 CHD1O14646 1710 aa30.08■■■□□ 2.41
PACRGL-230ENST00000514292 ADAMTS12P58397 1594 aa30.04■■■□□ 2.4
PACRGL-230ENST00000514292 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
PACRGL-230ENST00000514292 CUL7Q14999 1698 aa29.95■■■□□ 2.39
PACRGL-230ENST00000514292 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
PACRGL-230ENST00000514292 CARMIL1Q5VZK9 1371 aa29.91■■■□□ 2.38
PACRGL-230ENST00000514292 EEA1Q15075 1411 aa29.87■■■□□ 2.37
PACRGL-230ENST00000514292 NUP160Q12769 1436 aa29.86■■■□□ 2.37
PACRGL-230ENST00000514292 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
PACRGL-230ENST00000514292 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
PACRGL-230ENST00000514292 CEP170Q5SW79 1584 aa29.77■■■□□ 2.36
PACRGL-230ENST00000514292 RAPGEF2Q9Y4G8 1499 aa29.75■■■□□ 2.35
PACRGL-230ENST00000514292 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
PACRGL-230ENST00000514292 KIAA0586Q9BVV6 1533 aa29.66■■■□□ 2.34
PACRGL-230ENST00000514292 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
PACRGL-230ENST00000514292 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms