RNA–Protein interactions for RNA: ENST00000513140.5

APBB2-224, Transcript of amyloid beta precursor protein binding family B member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APBB2, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB2-224ENST00000513140 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
APBB2-224ENST00000513140 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
APBB2-224ENST00000513140 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
APBB2-224ENST00000513140 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
APBB2-224ENST00000513140 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
APBB2-224ENST00000513140 ABCC9O60706 1549 aa15.23■□□□□ 0.03
APBB2-224ENST00000513140 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
APBB2-224ENST00000513140 MYO15BQ96JP2 1530 aa15.13■□□□□ 0.01
APBB2-224ENST00000513140 NACADO15069 1562 aa15□□□□□ -0.01
APBB2-224ENST00000513140 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
APBB2-224ENST00000513140 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
APBB2-224ENST00000513140 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
APBB2-224ENST00000513140 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
APBB2-224ENST00000513140 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
APBB2-224ENST00000513140 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.07
APBB2-224ENST00000513140 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
APBB2-224ENST00000513140 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
APBB2-224ENST00000513140 WIZO95785 1651 aa14.44□□□□□ -0.1
APBB2-224ENST00000513140 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
APBB2-224ENST00000513140 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
APBB2-224ENST00000513140 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
APBB2-224ENST00000513140 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
APBB2-224ENST00000513140 EIF4G1Q04637 1599 aaKnown RBP14.23□□□□□ -0.13
APBB2-224ENST00000513140 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
APBB2-224ENST00000513140 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.15
APBB2-224ENST00000513140 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
APBB2-224ENST00000513140 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
APBB2-224ENST00000513140 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
APBB2-224ENST00000513140 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
APBB2-224ENST00000513140 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
APBB2-224ENST00000513140 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
APBB2-224ENST00000513140 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
APBB2-224ENST00000513140 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
APBB2-224ENST00000513140 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
APBB2-224ENST00000513140 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
APBB2-224ENST00000513140 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
APBB2-224ENST00000513140 PRDM2Q13029 1718 aa13.69□□□□□ -0.22
APBB2-224ENST00000513140 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
APBB2-224ENST00000513140 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
APBB2-224ENST00000513140 SOGA1O94964 1423 aa13.62□□□□□ -0.23
APBB2-224ENST00000513140 CFTRP13569 1480 aa13.62□□□□□ -0.23
APBB2-224ENST00000513140 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
APBB2-224ENST00000513140 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.23
APBB2-224ENST00000513140 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
APBB2-224ENST00000513140 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
APBB2-224ENST00000513140 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
APBB2-224ENST00000513140 CUX1P39880 1505 aa13.53□□□□□ -0.24
APBB2-224ENST00000513140 NESP48681 1621 aa13.51□□□□□ -0.25
APBB2-224ENST00000513140 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
APBB2-224ENST00000513140 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
APBB2-224ENST00000513140 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
APBB2-224ENST00000513140 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
APBB2-224ENST00000513140 LAMC3Q9Y6N6 1575 aa13.38□□□□□ -0.27
APBB2-224ENST00000513140 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
APBB2-224ENST00000513140 KIF21BO75037 1637 aa13.32□□□□□ -0.28
APBB2-224ENST00000513140 HRCP23327 699 aa13.31□□□□□ -0.28
APBB2-224ENST00000513140 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
APBB2-224ENST00000513140 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
APBB2-224ENST00000513140 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
APBB2-224ENST00000513140 EEA1Q15075 1411 aa13.29□□□□□ -0.28
APBB2-224ENST00000513140 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
APBB2-224ENST00000513140 TOPBP1Q92547 1522 aa13.27□□□□□ -0.28
APBB2-224ENST00000513140 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
APBB2-224ENST00000513140 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
APBB2-224ENST00000513140 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
APBB2-224ENST00000513140 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
APBB2-224ENST00000513140 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
APBB2-224ENST00000513140 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
APBB2-224ENST00000513140 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
APBB2-224ENST00000513140 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
APBB2-224ENST00000513140 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
APBB2-224ENST00000513140 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
APBB2-224ENST00000513140 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
APBB2-224ENST00000513140 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
APBB2-224ENST00000513140 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
APBB2-224ENST00000513140 CUX2O14529 1486 aa13.15□□□□□ -0.3
APBB2-224ENST00000513140 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
APBB2-224ENST00000513140 IGF1RP08069 1367 aa13.13□□□□□ -0.31
APBB2-224ENST00000513140 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
APBB2-224ENST00000513140 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
APBB2-224ENST00000513140 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
APBB2-224ENST00000513140 WDR62O43379 1518 aa13.09□□□□□ -0.31
APBB2-224ENST00000513140 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
APBB2-224ENST00000513140 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
APBB2-224ENST00000513140 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
APBB2-224ENST00000513140 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.32
APBB2-224ENST00000513140 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.33
APBB2-224ENST00000513140 CUL7Q14999 1698 aa13.02□□□□□ -0.33
APBB2-224ENST00000513140 CLIP1P30622 1438 aa13.01□□□□□ -0.33
APBB2-224ENST00000513140 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
APBB2-224ENST00000513140 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
APBB2-224ENST00000513140 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
APBB2-224ENST00000513140 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
APBB2-224ENST00000513140 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
APBB2-224ENST00000513140 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
APBB2-224ENST00000513140 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.33
APBB2-224ENST00000513140 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
APBB2-224ENST00000513140 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
APBB2-224ENST00000513140 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
APBB2-224ENST00000513140 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms