RNA–Protein interactions for RNA: ENST00000512611.5

RAPGEF6-211, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best)

Gene RAPGEF6, Length 3,683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-211ENST00000512611 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
RAPGEF6-211ENST00000512611 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
RAPGEF6-211ENST00000512611 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.51
RAPGEF6-211ENST00000512611 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
RAPGEF6-211ENST00000512611 HRCP23327 699 aa11.54□□□□□ -0.56
RAPGEF6-211ENST00000512611 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.56
RAPGEF6-211ENST00000512611 PCGF6Q9BYE7 350 aa11.51□□□□□ -0.57
RAPGEF6-211ENST00000512611 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
RAPGEF6-211ENST00000512611 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
RAPGEF6-211ENST00000512611 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
RAPGEF6-211ENST00000512611 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
RAPGEF6-211ENST00000512611 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
RAPGEF6-211ENST00000512611 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
RAPGEF6-211ENST00000512611 TRIM26Q12899 539 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF6-211ENST00000512611 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
RAPGEF6-211ENST00000512611 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
RAPGEF6-211ENST00000512611 SCAF1Q9H7N4 1312 aaKnown RBP10.91□□□□□ -0.66
RAPGEF6-211ENST00000512611 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
RAPGEF6-211ENST00000512611 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
RAPGEF6-211ENST00000512611 ZEB1P37275 1124 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF6-211ENST00000512611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF6-211ENST00000512611 ABCC9O60706 1549 aa10.75□□□□□ -0.69
RAPGEF6-211ENST00000512611 RB1CC1Q8TDY2 1594 aa10.74□□□□□ -0.69
RAPGEF6-211ENST00000512611 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
RAPGEF6-211ENST00000512611 TTBK1Q5TCY1 1321 aaPredicted RBP10.7□□□□□ -0.7
RAPGEF6-211ENST00000512611 NEUROD1Q13562 356 aa10.68□□□□□ -0.7
RAPGEF6-211ENST00000512611 CECR2Q9BXF3 1484 aa10.63□□□□□ -0.71
RAPGEF6-211ENST00000512611 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF6-211ENST00000512611 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
RAPGEF6-211ENST00000512611 ACIN1Q9UKV3 1341 aaKnown RBP10.61□□□□□ -0.71
RAPGEF6-211ENST00000512611 GTF3C3Q9Y5Q9 886 aa10.58□□□□□ -0.72
RAPGEF6-211ENST00000512611 MROH2BQ7Z745 1585 aa10.55□□□□□ -0.72
RAPGEF6-211ENST00000512611 DIEXFQ68CQ4 756 aaKnown RBP10.55□□□□□ -0.72
RAPGEF6-211ENST00000512611 WIZO95785 1651 aa10.51□□□□□ -0.73
RAPGEF6-211ENST00000512611 YTHDC1Q96MU7 727 aaKnown RBP10.46□□□□□ -0.73
RAPGEF6-211ENST00000512611 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
RAPGEF6-211ENST00000512611 CCDC88BA6NC98 1476 aa10.43□□□□□ -0.74
RAPGEF6-211ENST00000512611 SOGA1O94964 1423 aa10.4□□□□□ -0.74
RAPGEF6-211ENST00000512611 CENPBP07199 599 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF6-211ENST00000512611 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
RAPGEF6-211ENST00000512611 CEP162Q5TB80 1403 aa10.37□□□□□ -0.75
RAPGEF6-211ENST00000512611 MIER1Q8N108 512 aa10.37□□□□□ -0.75
RAPGEF6-211ENST00000512611 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
RAPGEF6-211ENST00000512611 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
RAPGEF6-211ENST00000512611 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
RAPGEF6-211ENST00000512611 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
RAPGEF6-211ENST00000512611 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
RAPGEF6-211ENST00000512611 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
RAPGEF6-211ENST00000512611 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
RAPGEF6-211ENST00000512611 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
RAPGEF6-211ENST00000512611 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
RAPGEF6-211ENST00000512611 NACADO15069 1562 aa10.25□□□□□ -0.77
RAPGEF6-211ENST00000512611 SMARCA2P51531 1590 aa10.21□□□□□ -0.77
RAPGEF6-211ENST00000512611 TOP2AP11388 1531 aaKnown RBP10.19□□□□□ -0.78
RAPGEF6-211ENST00000512611 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
RAPGEF6-211ENST00000512611 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
RAPGEF6-211ENST00000512611 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
RAPGEF6-211ENST00000512611 CLIP1P30622 1438 aa10.11□□□□□ -0.79
RAPGEF6-211ENST00000512611 KCNH8Q96L42 1107 aa10.1□□□□□ -0.79
RAPGEF6-211ENST00000512611 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
RAPGEF6-211ENST00000512611 RAPGEF2Q9Y4G8 1499 aa10.08□□□□□ -0.8
RAPGEF6-211ENST00000512611 SYNJ1O43426 1573 aa10.08□□□□□ -0.8
RAPGEF6-211ENST00000512611 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
RAPGEF6-211ENST00000512611 EEA1Q15075 1411 aa10.07□□□□□ -0.8
RAPGEF6-211ENST00000512611 APLP2Q06481 763 aa10.05□□□□□ -0.8
RAPGEF6-211ENST00000512611 VPS8Q8N3P4 1428 aa10.05□□□□□ -0.8
RAPGEF6-211ENST00000512611 MYT1Q01538 1121 aa10.05□□□□□ -0.8
RAPGEF6-211ENST00000512611 DHX57Q6P158 1386 aaKnown RBP10.04□□□□□ -0.8
RAPGEF6-211ENST00000512611 CEP164Q9UPV0 1460 aa10.03□□□□□ -0.8
RAPGEF6-211ENST00000512611 UNC13AQ9UPW8 1703 aa10.03□□□□□ -0.8
RAPGEF6-211ENST00000512611 ITGAEP38570 1179 aa10.02□□□□□ -0.81
RAPGEF6-211ENST00000512611 KIF21BO75037 1637 aa10.01□□□□□ -0.81
RAPGEF6-211ENST00000512611 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
RAPGEF6-211ENST00000512611 BCANQ96GW7 911 aa9.99□□□□□ -0.81
RAPGEF6-211ENST00000512611 HIRIP3Q9BW71 556 aaPredicted RBP9.94□□□□□ -0.82
RAPGEF6-211ENST00000512611 ARAP1Q96P48 1450 aa9.92□□□□□ -0.82
RAPGEF6-211ENST00000512611 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
RAPGEF6-211ENST00000512611 BAZ1BQ9UIG0 1483 aaKnown RBP9.9□□□□□ -0.82
RAPGEF6-211ENST00000512611 SIN3AQ96ST3 1273 aa9.89□□□□□ -0.83
RAPGEF6-211ENST00000512611 DDX10Q13206 875 aaKnown RBP9.89□□□□□ -0.83
RAPGEF6-211ENST00000512611 ATAD2BQ9ULI0 1458 aa9.88□□□□□ -0.83
RAPGEF6-211ENST00000512611 FKBP8Q14318 412 aa9.87□□□□□ -0.83
RAPGEF6-211ENST00000512611 CLSPNQ9HAW4 1339 aa9.87□□□□□ -0.83
RAPGEF6-211ENST00000512611 ANP32EQ9BTT0 268 aa9.85□□□□□ -0.83
RAPGEF6-211ENST00000512611 TRIM52Q96A61 297 aa9.85□□□□□ -0.83
RAPGEF6-211ENST00000512611 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
RAPGEF6-211ENST00000512611 RRBP1Q9P2E9 1410 aaKnown RBP9.84□□□□□ -0.83
RAPGEF6-211ENST00000512611 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
RAPGEF6-211ENST00000512611 RAB3GAP2Q9H2M9 1393 aa9.84□□□□□ -0.83
RAPGEF6-211ENST00000512611 CCNB3Q8WWL7 1395 aa9.84□□□□□ -0.83
RAPGEF6-211ENST00000512611 MAPKBP1O60336 1514 aa9.82□□□□□ -0.84
RAPGEF6-211ENST00000512611 TOP2BQ02880 1626 aa9.82□□□□□ -0.84
RAPGEF6-211ENST00000512611 ARHGAP35Q9NRY4 1499 aa9.8□□□□□ -0.84
RAPGEF6-211ENST00000512611 WDR97A6NE52 1622 aa9.8□□□□□ -0.84
RAPGEF6-211ENST00000512611 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
RAPGEF6-211ENST00000512611 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
RAPGEF6-211ENST00000512611 FAM50AQ14320 339 aaKnown RBP9.78□□□□□ -0.84
RAPGEF6-211ENST00000512611 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.84
RAPGEF6-211ENST00000512611 CUX1P39880 1505 aa9.77□□□□□ -0.85
RAPGEF6-211ENST00000512611 CUX2O14529 1486 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms