RNA–Protein interactions for RNA: ENST00000511440.1

ZCCHC10-208, Transcript of zinc finger CCHC-type containing 10, humanhuman

TSL 4

Gene ZCCHC10, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC10-208ENST00000511440 AEBP2Q6ZN18 517 aaPredicted RBP25.14■■□□□ 1.62
ZCCHC10-208ENST00000511440 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
ZCCHC10-208ENST00000511440 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
ZCCHC10-208ENST00000511440 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
ZCCHC10-208ENST00000511440 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
ZCCHC10-208ENST00000511440 FOXD1Q16676 465 aa20.24■□□□□ 0.83
ZCCHC10-208ENST00000511440 MSH5O43196 834 aa19.33■□□□□ 0.68
ZCCHC10-208ENST00000511440 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
ZCCHC10-208ENST00000511440 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
ZCCHC10-208ENST00000511440 ADRA2BP18089 450 aa18.13■□□□□ 0.49
ZCCHC10-208ENST00000511440 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
ZCCHC10-208ENST00000511440 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
ZCCHC10-208ENST00000511440 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
ZCCHC10-208ENST00000511440 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
ZCCHC10-208ENST00000511440 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
ZCCHC10-208ENST00000511440 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
ZCCHC10-208ENST00000511440 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
ZCCHC10-208ENST00000511440 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
ZCCHC10-208ENST00000511440 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
ZCCHC10-208ENST00000511440 POTEHQ6S545 545 aa15.76■□□□□ 0.11
ZCCHC10-208ENST00000511440 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
ZCCHC10-208ENST00000511440 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
ZCCHC10-208ENST00000511440 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
ZCCHC10-208ENST00000511440 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
ZCCHC10-208ENST00000511440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
ZCCHC10-208ENST00000511440 DSG3P32926 999 aa15.05■□□□□ -0
ZCCHC10-208ENST00000511440 CAPN15O75808 1086 aa14.93□□□□□ -0.02
ZCCHC10-208ENST00000511440 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
ZCCHC10-208ENST00000511440 NCBP3Q53F19 620 aaKnown RBP14.86□□□□□ -0.03
ZCCHC10-208ENST00000511440 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
ZCCHC10-208ENST00000511440 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
ZCCHC10-208ENST00000511440 ABCB7O75027 752 aa14.49□□□□□ -0.09
ZCCHC10-208ENST00000511440 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
ZCCHC10-208ENST00000511440 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
ZCCHC10-208ENST00000511440 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
ZCCHC10-208ENST00000511440 APLP2Q06481 763 aa14.42□□□□□ -0.1
ZCCHC10-208ENST00000511440 RBM42Q9BTD8 480 aaKnown RBP14.42□□□□□ -0.1
ZCCHC10-208ENST00000511440 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
ZCCHC10-208ENST00000511440 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
ZCCHC10-208ENST00000511440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
ZCCHC10-208ENST00000511440 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
ZCCHC10-208ENST00000511440 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
ZCCHC10-208ENST00000511440 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
ZCCHC10-208ENST00000511440 POLA2Q14181 598 aa13.89□□□□□ -0.19
ZCCHC10-208ENST00000511440 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
ZCCHC10-208ENST00000511440 HAX1O00165 279 aa13.88□□□□□ -0.19
ZCCHC10-208ENST00000511440 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
ZCCHC10-208ENST00000511440 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
ZCCHC10-208ENST00000511440 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
ZCCHC10-208ENST00000511440 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
ZCCHC10-208ENST00000511440 EVX2Q03828 476 aa13.59□□□□□ -0.23
ZCCHC10-208ENST00000511440 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
ZCCHC10-208ENST00000511440 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
ZCCHC10-208ENST00000511440 KCNA4P22459 653 aa13.53□□□□□ -0.24
ZCCHC10-208ENST00000511440 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
ZCCHC10-208ENST00000511440 LHX8Q68G74 356 aa13.46□□□□□ -0.25
ZCCHC10-208ENST00000511440 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
ZCCHC10-208ENST00000511440 GABBR2O75899 941 aa13.27□□□□□ -0.29
ZCCHC10-208ENST00000511440 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
ZCCHC10-208ENST00000511440 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
ZCCHC10-208ENST00000511440 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
ZCCHC10-208ENST00000511440 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
ZCCHC10-208ENST00000511440 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
ZCCHC10-208ENST00000511440 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
ZCCHC10-208ENST00000511440 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
ZCCHC10-208ENST00000511440 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
ZCCHC10-208ENST00000511440 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
ZCCHC10-208ENST00000511440 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
ZCCHC10-208ENST00000511440 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
ZCCHC10-208ENST00000511440 FBLN2P98095 1184 aa12.86□□□□□ -0.35
ZCCHC10-208ENST00000511440 CLCN6P51797 869 aa12.83□□□□□ -0.36
ZCCHC10-208ENST00000511440 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
ZCCHC10-208ENST00000511440 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
ZCCHC10-208ENST00000511440 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
ZCCHC10-208ENST00000511440 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
ZCCHC10-208ENST00000511440 POTEMA6NI47 508 aa12.73□□□□□ -0.37
ZCCHC10-208ENST00000511440 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
ZCCHC10-208ENST00000511440 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
ZCCHC10-208ENST00000511440 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
ZCCHC10-208ENST00000511440 ATXN8OSP0DMR3 200 aa12.64□□□□□ -0.39
ZCCHC10-208ENST00000511440 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
ZCCHC10-208ENST00000511440 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
ZCCHC10-208ENST00000511440 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
ZCCHC10-208ENST00000511440 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
ZCCHC10-208ENST00000511440 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
ZCCHC10-208ENST00000511440 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
ZCCHC10-208ENST00000511440 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
ZCCHC10-208ENST00000511440 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
ZCCHC10-208ENST00000511440 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
ZCCHC10-208ENST00000511440 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
ZCCHC10-208ENST00000511440 ZBTB22O15209 634 aa12.4□□□□□ -0.42
ZCCHC10-208ENST00000511440 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
ZCCHC10-208ENST00000511440 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
ZCCHC10-208ENST00000511440 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
ZCCHC10-208ENST00000511440 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
ZCCHC10-208ENST00000511440 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
ZCCHC10-208ENST00000511440 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
ZCCHC10-208ENST00000511440 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
ZCCHC10-208ENST00000511440 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
ZCCHC10-208ENST00000511440 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms