RNA–Protein interactions for RNA: ENST00000510891.1

ABCC3-211, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-211ENST00000510891 NISCHQ9Y2I1 1504 aa40.41■■■■■ 4.06
ABCC3-211ENST00000510891 CCDC180Q9P1Z9 1646 aa35.96■■■■□ 3.35
ABCC3-211ENST00000510891 ABCC9O60706 1549 aa35.4■■■■□ 3.26
ABCC3-211ENST00000510891 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
ABCC3-211ENST00000510891 NACADO15069 1562 aa33.92■■■■□ 3.02
ABCC3-211ENST00000510891 DCAF8L2P0C7V8 631 aa33.86■■■■□ 3.01
ABCC3-211ENST00000510891 MYO15BQ96JP2 1530 aa33.69■■■□□ 2.98
ABCC3-211ENST00000510891 ZCCHC6Q5VYS8 1495 aaKnown RBP33.58■■■□□ 2.97
ABCC3-211ENST00000510891 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
ABCC3-211ENST00000510891 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
ABCC3-211ENST00000510891 PABPN1Q86U42 306 aaKnown RBP eCLIP33.1■■■□□ 2.89
ABCC3-211ENST00000510891 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
ABCC3-211ENST00000510891 DNAJC5BQ9UF47 199 aa32.77■■■□□ 2.84
ABCC3-211ENST00000510891 SCRIBQ14160 1630 aa32.76■■■□□ 2.83
ABCC3-211ENST00000510891 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.82
ABCC3-211ENST00000510891 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
ABCC3-211ENST00000510891 CC2D2AQ9P2K1 1620 aa32.01■■■□□ 2.72
ABCC3-211ENST00000510891 CECR2Q9BXF3 1484 aa31.87■■■□□ 2.69
ABCC3-211ENST00000510891 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
ABCC3-211ENST00000510891 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
ABCC3-211ENST00000510891 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
ABCC3-211ENST00000510891 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
ABCC3-211ENST00000510891 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
ABCC3-211ENST00000510891 MROH2BQ7Z745 1585 aa31.11■■■□□ 2.57
ABCC3-211ENST00000510891 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
ABCC3-211ENST00000510891 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
ABCC3-211ENST00000510891 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
ABCC3-211ENST00000510891 WIZO95785 1651 aa30.73■■■□□ 2.51
ABCC3-211ENST00000510891 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
ABCC3-211ENST00000510891 NESP48681 1621 aa30.58■■■□□ 2.49
ABCC3-211ENST00000510891 ERCC6Q03468 1493 aa30.54■■■□□ 2.48
ABCC3-211ENST00000510891 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
ABCC3-211ENST00000510891 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
ABCC3-211ENST00000510891 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
ABCC3-211ENST00000510891 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
ABCC3-211ENST00000510891 CUX2O14529 1486 aa30.33■■■□□ 2.45
ABCC3-211ENST00000510891 CFTRP13569 1480 aa30.17■■■□□ 2.42
ABCC3-211ENST00000510891 KIF21AQ7Z4S6 1674 aa30.15■■■□□ 2.42
ABCC3-211ENST00000510891 THOC2Q8NI27 1593 aaKnown RBP30.13■■■□□ 2.41
ABCC3-211ENST00000510891 CCDC88BA6NC98 1476 aa30.1■■■□□ 2.41
ABCC3-211ENST00000510891 FANCD2Q9BXW9 1451 aa30.01■■■□□ 2.4
ABCC3-211ENST00000510891 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
ABCC3-211ENST00000510891 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
ABCC3-211ENST00000510891 WDR62O43379 1518 aa29.89■■■□□ 2.38
ABCC3-211ENST00000510891 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
ABCC3-211ENST00000510891 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
ABCC3-211ENST00000510891 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
ABCC3-211ENST00000510891 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
ABCC3-211ENST00000510891 ABCC8Q09428 1581 aa29.54■■■□□ 2.32
ABCC3-211ENST00000510891 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
ABCC3-211ENST00000510891 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
ABCC3-211ENST00000510891 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
ABCC3-211ENST00000510891 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
ABCC3-211ENST00000510891 POLA1P09884 1462 aaPredicted RBP29.23■■■□□ 2.27
ABCC3-211ENST00000510891 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
ABCC3-211ENST00000510891 CUX1P39880 1505 aa29.19■■■□□ 2.26
ABCC3-211ENST00000510891 SOGA1O94964 1423 aa29.16■■■□□ 2.26
ABCC3-211ENST00000510891 FGD5Q6ZNL6 1462 aa29.12■■■□□ 2.25
ABCC3-211ENST00000510891 RAD54L2Q9Y4B4 1467 aa29.11■■■□□ 2.25
ABCC3-211ENST00000510891 OSCARQ8IYS5 282 aa29.11■■■□□ 2.25
ABCC3-211ENST00000510891 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.25
ABCC3-211ENST00000510891 EIF4G3O43432 1585 aaKnown RBP29.08■■■□□ 2.25
ABCC3-211ENST00000510891 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
ABCC3-211ENST00000510891 WDR97A6NE52 1622 aa28.97■■■□□ 2.23
ABCC3-211ENST00000510891 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
ABCC3-211ENST00000510891 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
ABCC3-211ENST00000510891 ABCA10Q8WWZ4 1543 aa28.87■■■□□ 2.21
ABCC3-211ENST00000510891 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
ABCC3-211ENST00000510891 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
ABCC3-211ENST00000510891 GRIN2BQ13224 1484 aa28.82■■■□□ 2.2
ABCC3-211ENST00000510891 GAPVD1Q14C86 1478 aa28.79■■■□□ 2.2
ABCC3-211ENST00000510891 FBLN2P98095 1184 aa28.78■■■□□ 2.2
ABCC3-211ENST00000510891 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
ABCC3-211ENST00000510891 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
ABCC3-211ENST00000510891 CHD1O14646 1710 aa28.73■■■□□ 2.19
ABCC3-211ENST00000510891 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
ABCC3-211ENST00000510891 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
ABCC3-211ENST00000510891 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
ABCC3-211ENST00000510891 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
ABCC3-211ENST00000510891 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
ABCC3-211ENST00000510891 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
ABCC3-211ENST00000510891 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
ABCC3-211ENST00000510891 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
ABCC3-211ENST00000510891 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
ABCC3-211ENST00000510891 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.15
ABCC3-211ENST00000510891 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
ABCC3-211ENST00000510891 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
ABCC3-211ENST00000510891 ADAMTS12P58397 1594 aa28.45■■■□□ 2.14
ABCC3-211ENST00000510891 GRIN2AQ12879 1464 aa28.43■■■□□ 2.14
ABCC3-211ENST00000510891 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
ABCC3-211ENST00000510891 NUP160Q12769 1436 aa28.35■■■□□ 2.13
ABCC3-211ENST00000510891 CYB5RLQ6IPT4 315 aa28.34■■■□□ 2.13
ABCC3-211ENST00000510891 IGF1RP08069 1367 aa28.33■■■□□ 2.13
ABCC3-211ENST00000510891 ARAP1Q96P48 1450 aa28.29■■■□□ 2.12
ABCC3-211ENST00000510891 CEP170Q5SW79 1584 aa28.27■■■□□ 2.12
ABCC3-211ENST00000510891 CUL7Q14999 1698 aa28.16■■■□□ 2.1
ABCC3-211ENST00000510891 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
ABCC3-211ENST00000510891 SHROOM2Q13796 1616 aa28.11■■■□□ 2.09
ABCC3-211ENST00000510891 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
ABCC3-211ENST00000510891 ERCC6L2Q5T890 1561 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms