RNA–Protein interactions for RNA: ENST00000510321.1

ABCE1-209, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 2

Gene ABCE1, Length 2,529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-209ENST00000510321 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
ABCE1-209ENST00000510321 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
ABCE1-209ENST00000510321 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
ABCE1-209ENST00000510321 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
ABCE1-209ENST00000510321 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
ABCE1-209ENST00000510321 HRCP23327 699 aa18.48■□□□□ 0.55
ABCE1-209ENST00000510321 ZCCHC6Q5VYS8 1495 aaKnown RBP18.45■□□□□ 0.54
ABCE1-209ENST00000510321 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
ABCE1-209ENST00000510321 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
ABCE1-209ENST00000510321 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
ABCE1-209ENST00000510321 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
ABCE1-209ENST00000510321 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
ABCE1-209ENST00000510321 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
ABCE1-209ENST00000510321 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
ABCE1-209ENST00000510321 ABCC9O60706 1549 aa17.47■□□□□ 0.39
ABCE1-209ENST00000510321 FAM9AQ8IZU1 332 aaPredicted RBP17.46■□□□□ 0.38
ABCE1-209ENST00000510321 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
ABCE1-209ENST00000510321 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
ABCE1-209ENST00000510321 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
ABCE1-209ENST00000510321 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
ABCE1-209ENST00000510321 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
ABCE1-209ENST00000510321 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
ABCE1-209ENST00000510321 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.36
ABCE1-209ENST00000510321 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
ABCE1-209ENST00000510321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
ABCE1-209ENST00000510321 NACADO15069 1562 aa17.09■□□□□ 0.33
ABCE1-209ENST00000510321 CECR2Q9BXF3 1484 aa17.08■□□□□ 0.33
ABCE1-209ENST00000510321 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
ABCE1-209ENST00000510321 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
ABCE1-209ENST00000510321 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
ABCE1-209ENST00000510321 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
ABCE1-209ENST00000510321 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
ABCE1-209ENST00000510321 WIZO95785 1651 aa16.93■□□□□ 0.3
ABCE1-209ENST00000510321 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
ABCE1-209ENST00000510321 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
ABCE1-209ENST00000510321 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
ABCE1-209ENST00000510321 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
ABCE1-209ENST00000510321 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
ABCE1-209ENST00000510321 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
ABCE1-209ENST00000510321 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
ABCE1-209ENST00000510321 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
ABCE1-209ENST00000510321 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
ABCE1-209ENST00000510321 SOGA1O94964 1423 aa16.68■□□□□ 0.26
ABCE1-209ENST00000510321 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
ABCE1-209ENST00000510321 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
ABCE1-209ENST00000510321 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
ABCE1-209ENST00000510321 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
ABCE1-209ENST00000510321 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.25
ABCE1-209ENST00000510321 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.25
ABCE1-209ENST00000510321 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
ABCE1-209ENST00000510321 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
ABCE1-209ENST00000510321 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
ABCE1-209ENST00000510321 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
ABCE1-209ENST00000510321 MIER1Q8N108 512 aa16.52■□□□□ 0.23
ABCE1-209ENST00000510321 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
ABCE1-209ENST00000510321 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
ABCE1-209ENST00000510321 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
ABCE1-209ENST00000510321 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
ABCE1-209ENST00000510321 EEA1Q15075 1411 aa16.39■□□□□ 0.21
ABCE1-209ENST00000510321 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
ABCE1-209ENST00000510321 CLIP1P30622 1438 aa16.29■□□□□ 0.2
ABCE1-209ENST00000510321 MYT1Q01538 1121 aa16.27■□□□□ 0.2
ABCE1-209ENST00000510321 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.19
ABCE1-209ENST00000510321 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
ABCE1-209ENST00000510321 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
ABCE1-209ENST00000510321 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
ABCE1-209ENST00000510321 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
ABCE1-209ENST00000510321 KIF21BO75037 1637 aa16.2■□□□□ 0.18
ABCE1-209ENST00000510321 APLP2Q06481 763 aa16.15■□□□□ 0.18
ABCE1-209ENST00000510321 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
ABCE1-209ENST00000510321 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
ABCE1-209ENST00000510321 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
ABCE1-209ENST00000510321 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
ABCE1-209ENST00000510321 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
ABCE1-209ENST00000510321 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
ABCE1-209ENST00000510321 ARAP1Q96P48 1450 aa16.01■□□□□ 0.15
ABCE1-209ENST00000510321 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
ABCE1-209ENST00000510321 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
ABCE1-209ENST00000510321 ITGAEP38570 1179 aa15.94■□□□□ 0.14
ABCE1-209ENST00000510321 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
ABCE1-209ENST00000510321 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
ABCE1-209ENST00000510321 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
ABCE1-209ENST00000510321 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
ABCE1-209ENST00000510321 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
ABCE1-209ENST00000510321 BCANQ96GW7 911 aa15.86■□□□□ 0.13
ABCE1-209ENST00000510321 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
ABCE1-209ENST00000510321 CUX2O14529 1486 aa15.84■□□□□ 0.13
ABCE1-209ENST00000510321 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
ABCE1-209ENST00000510321 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
ABCE1-209ENST00000510321 MAPKBP1O60336 1514 aa15.81■□□□□ 0.12
ABCE1-209ENST00000510321 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
ABCE1-209ENST00000510321 ARHGAP35Q9NRY4 1499 aa15.8■□□□□ 0.12
ABCE1-209ENST00000510321 CUX1P39880 1505 aa15.78■□□□□ 0.12
ABCE1-209ENST00000510321 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
ABCE1-209ENST00000510321 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
ABCE1-209ENST00000510321 ANP32EQ9BTT0 268 aa15.76■□□□□ 0.11
ABCE1-209ENST00000510321 FKBP8Q14318 412 aa15.74■□□□□ 0.11
ABCE1-209ENST00000510321 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
ABCE1-209ENST00000510321 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
ABCE1-209ENST00000510321 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 474 ms