RNA–Protein interactions for RNA: ENST00000509430.5

GFM2-207, Transcript of G elongation factor mitochondrial 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM2, Length 3,047 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-207ENST00000509430 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
GFM2-207ENST00000509430 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
GFM2-207ENST00000509430 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
GFM2-207ENST00000509430 ABCC9O60706 1549 aa16.17■□□□□ 0.18
GFM2-207ENST00000509430 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
GFM2-207ENST00000509430 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
GFM2-207ENST00000509430 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
GFM2-207ENST00000509430 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
GFM2-207ENST00000509430 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
GFM2-207ENST00000509430 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
GFM2-207ENST00000509430 NACADO15069 1562 aa15.77■□□□□ 0.12
GFM2-207ENST00000509430 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
GFM2-207ENST00000509430 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
GFM2-207ENST00000509430 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
GFM2-207ENST00000509430 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
GFM2-207ENST00000509430 RTN4Q9NQC3 1192 aaKnown RBP15.46■□□□□ 0.06
GFM2-207ENST00000509430 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
GFM2-207ENST00000509430 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
GFM2-207ENST00000509430 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
GFM2-207ENST00000509430 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
GFM2-207ENST00000509430 PRKCSHP14314 528 aaPredicted RBP15.27■□□□□ 0.04
GFM2-207ENST00000509430 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
GFM2-207ENST00000509430 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
GFM2-207ENST00000509430 MYT1Q01538 1121 aa15.06■□□□□ 0
GFM2-207ENST00000509430 APLP2Q06481 763 aa14.98□□□□□ -0.01
GFM2-207ENST00000509430 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
GFM2-207ENST00000509430 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
GFM2-207ENST00000509430 CECR2Q9BXF3 1484 aa14.91□□□□□ -0.02
GFM2-207ENST00000509430 ERICH6Q7L0X2 663 aa14.89□□□□□ -0.03
GFM2-207ENST00000509430 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
GFM2-207ENST00000509430 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
GFM2-207ENST00000509430 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
GFM2-207ENST00000509430 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
GFM2-207ENST00000509430 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
GFM2-207ENST00000509430 KCNA4P22459 653 aa14.76□□□□□ -0.05
GFM2-207ENST00000509430 TIMELESSQ9UNS1 1208 aa14.71□□□□□ -0.05
GFM2-207ENST00000509430 AMER1Q5JTC6 1135 aaPredicted RBP14.71□□□□□ -0.06
GFM2-207ENST00000509430 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
GFM2-207ENST00000509430 WIZO95785 1651 aa14.68□□□□□ -0.06
GFM2-207ENST00000509430 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
GFM2-207ENST00000509430 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
GFM2-207ENST00000509430 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
GFM2-207ENST00000509430 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
GFM2-207ENST00000509430 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
GFM2-207ENST00000509430 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
GFM2-207ENST00000509430 HMGXB3Q12766 1538 aa14.52□□□□□ -0.08
GFM2-207ENST00000509430 LOC105371045A0A1W2PR82 267 aa14.5□□□□□ -0.09
GFM2-207ENST00000509430 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
GFM2-207ENST00000509430 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
GFM2-207ENST00000509430 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
GFM2-207ENST00000509430 ARXQ96QS3 562 aa14.49□□□□□ -0.09
GFM2-207ENST00000509430 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
GFM2-207ENST00000509430 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
GFM2-207ENST00000509430 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
GFM2-207ENST00000509430 RANGAP1P46060 587 aaPredicted RBP14.34□□□□□ -0.11
GFM2-207ENST00000509430 EIF5BO60841 1220 aaKnown RBP14.33□□□□□ -0.11
GFM2-207ENST00000509430 CCDC88BA6NC98 1476 aa14.33□□□□□ -0.12
GFM2-207ENST00000509430 TAOK2Q9UL54 1235 aa14.26□□□□□ -0.13
GFM2-207ENST00000509430 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
GFM2-207ENST00000509430 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
GFM2-207ENST00000509430 TPRNQ4KMQ1 711 aa14.16□□□□□ -0.14
GFM2-207ENST00000509430 PODXL2Q9NZ53 605 aa14.16□□□□□ -0.14
GFM2-207ENST00000509430 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
GFM2-207ENST00000509430 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
GFM2-207ENST00000509430 CFTRP13569 1480 aa14.14□□□□□ -0.15
GFM2-207ENST00000509430 NESP48681 1621 aa14.13□□□□□ -0.15
GFM2-207ENST00000509430 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
GFM2-207ENST00000509430 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
GFM2-207ENST00000509430 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
GFM2-207ENST00000509430 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
GFM2-207ENST00000509430 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
GFM2-207ENST00000509430 HRCP23327 699 aa14.1□□□□□ -0.15
GFM2-207ENST00000509430 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.17
GFM2-207ENST00000509430 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
GFM2-207ENST00000509430 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
GFM2-207ENST00000509430 SOGA1O94964 1423 aa13.97□□□□□ -0.17
GFM2-207ENST00000509430 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
GFM2-207ENST00000509430 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
GFM2-207ENST00000509430 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
GFM2-207ENST00000509430 PPARGC1BQ86YN6 1023 aaKnown RBP13.91□□□□□ -0.18
GFM2-207ENST00000509430 BCANQ96GW7 911 aa13.91□□□□□ -0.18
GFM2-207ENST00000509430 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
GFM2-207ENST00000509430 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
GFM2-207ENST00000509430 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
GFM2-207ENST00000509430 THOC2Q8NI27 1593 aaKnown RBP13.86□□□□□ -0.19
GFM2-207ENST00000509430 CUX1P39880 1505 aa13.86□□□□□ -0.19
GFM2-207ENST00000509430 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
GFM2-207ENST00000509430 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
GFM2-207ENST00000509430 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.19
GFM2-207ENST00000509430 TOP2BQ02880 1626 aa13.83□□□□□ -0.2
GFM2-207ENST00000509430 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
GFM2-207ENST00000509430 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
GFM2-207ENST00000509430 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
GFM2-207ENST00000509430 WDR62O43379 1518 aa13.81□□□□□ -0.2
GFM2-207ENST00000509430 EEA1Q15075 1411 aa13.76□□□□□ -0.21
GFM2-207ENST00000509430 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
GFM2-207ENST00000509430 NPM2Q86SE8 214 aaKnown RBP13.76□□□□□ -0.21
GFM2-207ENST00000509430 TNIKQ9UKE5 1360 aa13.75□□□□□ -0.21
GFM2-207ENST00000509430 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
GFM2-207ENST00000509430 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms