RNA–Protein interactions for RNA: ENST00000509405.5

LINC00461-210, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-210ENST00000509405 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
LINC00461-210ENST00000509405 AEBP2Q6ZN18 517 aaPredicted RBP19.49■□□□□ 0.71
LINC00461-210ENST00000509405 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
LINC00461-210ENST00000509405 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
LINC00461-210ENST00000509405 ABCC9O60706 1549 aa17.64■□□□□ 0.41
LINC00461-210ENST00000509405 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
LINC00461-210ENST00000509405 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
LINC00461-210ENST00000509405 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
LINC00461-210ENST00000509405 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
LINC00461-210ENST00000509405 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
LINC00461-210ENST00000509405 NACADO15069 1562 aa16.7■□□□□ 0.26
LINC00461-210ENST00000509405 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
LINC00461-210ENST00000509405 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
LINC00461-210ENST00000509405 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
LINC00461-210ENST00000509405 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
LINC00461-210ENST00000509405 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC00461-210ENST00000509405 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
LINC00461-210ENST00000509405 BICRAQ9NZM4 1560 aa16.32■□□□□ 0.2
LINC00461-210ENST00000509405 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
LINC00461-210ENST00000509405 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
LINC00461-210ENST00000509405 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
LINC00461-210ENST00000509405 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
LINC00461-210ENST00000509405 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
LINC00461-210ENST00000509405 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
LINC00461-210ENST00000509405 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
LINC00461-210ENST00000509405 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
LINC00461-210ENST00000509405 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
LINC00461-210ENST00000509405 FOXD1Q16676 465 aa15.56■□□□□ 0.08
LINC00461-210ENST00000509405 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
LINC00461-210ENST00000509405 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
LINC00461-210ENST00000509405 WIZO95785 1651 aa15.51■□□□□ 0.07
LINC00461-210ENST00000509405 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
LINC00461-210ENST00000509405 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
LINC00461-210ENST00000509405 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
LINC00461-210ENST00000509405 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
LINC00461-210ENST00000509405 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
LINC00461-210ENST00000509405 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
LINC00461-210ENST00000509405 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
LINC00461-210ENST00000509405 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
LINC00461-210ENST00000509405 EEA1Q15075 1411 aa15.22■□□□□ 0.03
LINC00461-210ENST00000509405 NESP48681 1621 aa15.21■□□□□ 0.02
LINC00461-210ENST00000509405 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
LINC00461-210ENST00000509405 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
LINC00461-210ENST00000509405 TRIM26Q12899 539 aaPredicted RBP15.11■□□□□ 0.01
LINC00461-210ENST00000509405 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
LINC00461-210ENST00000509405 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
LINC00461-210ENST00000509405 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
LINC00461-210ENST00000509405 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
LINC00461-210ENST00000509405 CUX2O14529 1486 aa15.02■□□□□ -0
LINC00461-210ENST00000509405 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
LINC00461-210ENST00000509405 THOC2Q8NI27 1593 aaKnown RBP15.02□□□□□ -0.01
LINC00461-210ENST00000509405 ABCC8Q09428 1581 aa15□□□□□ -0.01
LINC00461-210ENST00000509405 HRCP23327 699 aa14.98□□□□□ -0.01
LINC00461-210ENST00000509405 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
LINC00461-210ENST00000509405 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
LINC00461-210ENST00000509405 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
LINC00461-210ENST00000509405 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
LINC00461-210ENST00000509405 ZEB1P37275 1124 aaPredicted RBP14.89□□□□□ -0.03
LINC00461-210ENST00000509405 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
LINC00461-210ENST00000509405 SOGA1O94964 1423 aa14.88□□□□□ -0.03
LINC00461-210ENST00000509405 CFTRP13569 1480 aa14.88□□□□□ -0.03
LINC00461-210ENST00000509405 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
LINC00461-210ENST00000509405 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
LINC00461-210ENST00000509405 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
LINC00461-210ENST00000509405 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
LINC00461-210ENST00000509405 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
LINC00461-210ENST00000509405 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
LINC00461-210ENST00000509405 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
LINC00461-210ENST00000509405 WDR62O43379 1518 aa14.8□□□□□ -0.04
LINC00461-210ENST00000509405 KIF21BO75037 1637 aa14.79□□□□□ -0.04
LINC00461-210ENST00000509405 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
LINC00461-210ENST00000509405 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
LINC00461-210ENST00000509405 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
LINC00461-210ENST00000509405 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
LINC00461-210ENST00000509405 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.06
LINC00461-210ENST00000509405 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.06
LINC00461-210ENST00000509405 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
LINC00461-210ENST00000509405 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
LINC00461-210ENST00000509405 APLP2Q06481 763 aa14.67□□□□□ -0.06
LINC00461-210ENST00000509405 CUX1P39880 1505 aa14.66□□□□□ -0.06
LINC00461-210ENST00000509405 CLIP1P30622 1438 aa14.66□□□□□ -0.06
LINC00461-210ENST00000509405 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
LINC00461-210ENST00000509405 MSH5O43196 834 aa14.63□□□□□ -0.07
LINC00461-210ENST00000509405 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
LINC00461-210ENST00000509405 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
LINC00461-210ENST00000509405 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
LINC00461-210ENST00000509405 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
LINC00461-210ENST00000509405 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
LINC00461-210ENST00000509405 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
LINC00461-210ENST00000509405 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
LINC00461-210ENST00000509405 IGF1RP08069 1367 aa14.49□□□□□ -0.09
LINC00461-210ENST00000509405 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
LINC00461-210ENST00000509405 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
LINC00461-210ENST00000509405 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
LINC00461-210ENST00000509405 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
LINC00461-210ENST00000509405 PPARGC1BQ86YN6 1023 aaKnown RBP14.45□□□□□ -0.1
LINC00461-210ENST00000509405 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
LINC00461-210ENST00000509405 ABCA10Q8WWZ4 1543 aa14.44□□□□□ -0.1
LINC00461-210ENST00000509405 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
LINC00461-210ENST00000509405 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms