RNA–Protein interactions for RNA: ENST00000508056.5

AC139493.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC139493.2, Length 1,612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC139493.2-201ENST00000508056 NISCHQ9Y2I1 1504 aa23.63■■□□□ 1.37
AC139493.2-201ENST00000508056 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
AC139493.2-201ENST00000508056 ABCC9O60706 1549 aa20.51■□□□□ 0.87
AC139493.2-201ENST00000508056 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.77
AC139493.2-201ENST00000508056 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
AC139493.2-201ENST00000508056 NACADO15069 1562 aa19.66■□□□□ 0.74
AC139493.2-201ENST00000508056 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
AC139493.2-201ENST00000508056 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.73
AC139493.2-201ENST00000508056 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
AC139493.2-201ENST00000508056 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
AC139493.2-201ENST00000508056 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
AC139493.2-201ENST00000508056 UNC13AQ9UPW8 1703 aa19.19■□□□□ 0.66
AC139493.2-201ENST00000508056 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
AC139493.2-201ENST00000508056 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.66
AC139493.2-201ENST00000508056 SCRIBQ14160 1630 aa19.02■□□□□ 0.63
AC139493.2-201ENST00000508056 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
AC139493.2-201ENST00000508056 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
AC139493.2-201ENST00000508056 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
AC139493.2-201ENST00000508056 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
AC139493.2-201ENST00000508056 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
AC139493.2-201ENST00000508056 HRCP23327 699 aa18.49■□□□□ 0.55
AC139493.2-201ENST00000508056 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
AC139493.2-201ENST00000508056 PCGF6Q9BYE7 350 aa18.29■□□□□ 0.52
AC139493.2-201ENST00000508056 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
AC139493.2-201ENST00000508056 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
AC139493.2-201ENST00000508056 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
AC139493.2-201ENST00000508056 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
AC139493.2-201ENST00000508056 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
AC139493.2-201ENST00000508056 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
AC139493.2-201ENST00000508056 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
AC139493.2-201ENST00000508056 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
AC139493.2-201ENST00000508056 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
AC139493.2-201ENST00000508056 WIZO95785 1651 aa18.09■□□□□ 0.49
AC139493.2-201ENST00000508056 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
AC139493.2-201ENST00000508056 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
AC139493.2-201ENST00000508056 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
AC139493.2-201ENST00000508056 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
AC139493.2-201ENST00000508056 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
AC139493.2-201ENST00000508056 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
AC139493.2-201ENST00000508056 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
AC139493.2-201ENST00000508056 NESP48681 1621 aa17.74■□□□□ 0.43
AC139493.2-201ENST00000508056 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
AC139493.2-201ENST00000508056 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
AC139493.2-201ENST00000508056 EEA1Q15075 1411 aa17.66■□□□□ 0.42
AC139493.2-201ENST00000508056 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
AC139493.2-201ENST00000508056 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
AC139493.2-201ENST00000508056 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
AC139493.2-201ENST00000508056 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
AC139493.2-201ENST00000508056 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
AC139493.2-201ENST00000508056 CUX2O14529 1486 aa17.53■□□□□ 0.4
AC139493.2-201ENST00000508056 CFTRP13569 1480 aa17.53■□□□□ 0.4
AC139493.2-201ENST00000508056 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
AC139493.2-201ENST00000508056 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
AC139493.2-201ENST00000508056 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
AC139493.2-201ENST00000508056 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
AC139493.2-201ENST00000508056 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
AC139493.2-201ENST00000508056 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
AC139493.2-201ENST00000508056 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
AC139493.2-201ENST00000508056 SOGA1O94964 1423 aa17.39■□□□□ 0.37
AC139493.2-201ENST00000508056 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
AC139493.2-201ENST00000508056 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
AC139493.2-201ENST00000508056 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
AC139493.2-201ENST00000508056 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
AC139493.2-201ENST00000508056 WDR62O43379 1518 aa17.33■□□□□ 0.37
AC139493.2-201ENST00000508056 KIF21BO75037 1637 aa17.29■□□□□ 0.36
AC139493.2-201ENST00000508056 CCER1Q8TC90 406 aaPredicted RBP17.28■□□□□ 0.36
AC139493.2-201ENST00000508056 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
AC139493.2-201ENST00000508056 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
AC139493.2-201ENST00000508056 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
AC139493.2-201ENST00000508056 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
AC139493.2-201ENST00000508056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
AC139493.2-201ENST00000508056 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
AC139493.2-201ENST00000508056 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
AC139493.2-201ENST00000508056 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
AC139493.2-201ENST00000508056 CLIP1P30622 1438 aa17.12■□□□□ 0.33
AC139493.2-201ENST00000508056 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
AC139493.2-201ENST00000508056 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
AC139493.2-201ENST00000508056 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
AC139493.2-201ENST00000508056 CUX1P39880 1505 aa17.08■□□□□ 0.32
AC139493.2-201ENST00000508056 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
AC139493.2-201ENST00000508056 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
AC139493.2-201ENST00000508056 APLP2Q06481 763 aa17.03■□□□□ 0.32
AC139493.2-201ENST00000508056 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.31
AC139493.2-201ENST00000508056 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
AC139493.2-201ENST00000508056 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
AC139493.2-201ENST00000508056 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
AC139493.2-201ENST00000508056 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
AC139493.2-201ENST00000508056 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
AC139493.2-201ENST00000508056 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
AC139493.2-201ENST00000508056 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
AC139493.2-201ENST00000508056 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
AC139493.2-201ENST00000508056 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
AC139493.2-201ENST00000508056 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
AC139493.2-201ENST00000508056 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
AC139493.2-201ENST00000508056 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
AC139493.2-201ENST00000508056 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
AC139493.2-201ENST00000508056 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
AC139493.2-201ENST00000508056 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
AC139493.2-201ENST00000508056 AQRO60306 1485 aaKnown RBP eCLIP16.87■□□□□ 0.29
AC139493.2-201ENST00000508056 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms