RNA–Protein interactions for RNA: ENST00000506882.5

CENPC-203, Transcript of centromere protein C, humanhuman

TSL 1 (best)

Gene CENPC, Length 3,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-203ENST00000506882 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
CENPC-203ENST00000506882 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
CENPC-203ENST00000506882 ABCC9O60706 1549 aa17.63■□□□□ 0.41
CENPC-203ENST00000506882 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
CENPC-203ENST00000506882 HRCP23327 699 aa17.41■□□□□ 0.38
CENPC-203ENST00000506882 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
CENPC-203ENST00000506882 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
CENPC-203ENST00000506882 NACADO15069 1562 aa17.13■□□□□ 0.33
CENPC-203ENST00000506882 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
CENPC-203ENST00000506882 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
CENPC-203ENST00000506882 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
CENPC-203ENST00000506882 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
CENPC-203ENST00000506882 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
CENPC-203ENST00000506882 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
CENPC-203ENST00000506882 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
CENPC-203ENST00000506882 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
CENPC-203ENST00000506882 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
CENPC-203ENST00000506882 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
CENPC-203ENST00000506882 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
CENPC-203ENST00000506882 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
CENPC-203ENST00000506882 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
CENPC-203ENST00000506882 MYT1Q01538 1121 aa16.41■□□□□ 0.22
CENPC-203ENST00000506882 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
CENPC-203ENST00000506882 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
CENPC-203ENST00000506882 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.19
CENPC-203ENST00000506882 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
CENPC-203ENST00000506882 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
CENPC-203ENST00000506882 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
CENPC-203ENST00000506882 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
CENPC-203ENST00000506882 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
CENPC-203ENST00000506882 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
CENPC-203ENST00000506882 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
CENPC-203ENST00000506882 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
CENPC-203ENST00000506882 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
CENPC-203ENST00000506882 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
CENPC-203ENST00000506882 WIZO95785 1651 aa15.9■□□□□ 0.14
CENPC-203ENST00000506882 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
CENPC-203ENST00000506882 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
CENPC-203ENST00000506882 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
CENPC-203ENST00000506882 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.13
CENPC-203ENST00000506882 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
CENPC-203ENST00000506882 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
CENPC-203ENST00000506882 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
CENPC-203ENST00000506882 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
CENPC-203ENST00000506882 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
CENPC-203ENST00000506882 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
CENPC-203ENST00000506882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
CENPC-203ENST00000506882 CCER1Q8TC90 406 aaPredicted RBP15.6■□□□□ 0.09
CENPC-203ENST00000506882 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.09
CENPC-203ENST00000506882 FAM9AQ8IZU1 332 aaPredicted RBP15.53■□□□□ 0.08
CENPC-203ENST00000506882 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
CENPC-203ENST00000506882 YTHDC1Q96MU7 727 aaKnown RBP15.47■□□□□ 0.07
CENPC-203ENST00000506882 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
CENPC-203ENST00000506882 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
CENPC-203ENST00000506882 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
CENPC-203ENST00000506882 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
CENPC-203ENST00000506882 BCL11AQ9H165 835 aa15.38■□□□□ 0.05
CENPC-203ENST00000506882 CFTRP13569 1480 aa15.36■□□□□ 0.05
CENPC-203ENST00000506882 NESP48681 1621 aa15.35■□□□□ 0.05
CENPC-203ENST00000506882 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
CENPC-203ENST00000506882 MIER1Q8N108 512 aa15.32■□□□□ 0.04
CENPC-203ENST00000506882 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
CENPC-203ENST00000506882 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
CENPC-203ENST00000506882 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
CENPC-203ENST00000506882 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
CENPC-203ENST00000506882 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
CENPC-203ENST00000506882 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
CENPC-203ENST00000506882 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
CENPC-203ENST00000506882 SUPT16HQ9Y5B9 1047 aaKnown RBP15.17■□□□□ 0.02
CENPC-203ENST00000506882 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
CENPC-203ENST00000506882 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
CENPC-203ENST00000506882 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
CENPC-203ENST00000506882 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
CENPC-203ENST00000506882 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
CENPC-203ENST00000506882 MRC2Q9UBG0 1479 aa15.05■□□□□ 0
CENPC-203ENST00000506882 CUX1P39880 1505 aa15.03■□□□□ -0
CENPC-203ENST00000506882 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
CENPC-203ENST00000506882 SYNJ1O43426 1573 aa15.02□□□□□ -0.01
CENPC-203ENST00000506882 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
CENPC-203ENST00000506882 DNMBPQ6XZF7 1577 aa15.01□□□□□ -0.01
CENPC-203ENST00000506882 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
CENPC-203ENST00000506882 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
CENPC-203ENST00000506882 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
CENPC-203ENST00000506882 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
CENPC-203ENST00000506882 WDR62O43379 1518 aa14.94□□□□□ -0.02
CENPC-203ENST00000506882 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
CENPC-203ENST00000506882 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
CENPC-203ENST00000506882 SOGA1O94964 1423 aa14.91□□□□□ -0.02
CENPC-203ENST00000506882 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
CENPC-203ENST00000506882 PRKCSHP14314 528 aaPredicted RBP14.87□□□□□ -0.03
CENPC-203ENST00000506882 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
CENPC-203ENST00000506882 CUX2O14529 1486 aa14.83□□□□□ -0.04
CENPC-203ENST00000506882 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
CENPC-203ENST00000506882 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
CENPC-203ENST00000506882 BCANQ96GW7 911 aa14.8□□□□□ -0.04
CENPC-203ENST00000506882 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
CENPC-203ENST00000506882 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
CENPC-203ENST00000506882 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
CENPC-203ENST00000506882 RBM19Q9Y4C8 960 aaKnown RBP14.79□□□□□ -0.04
CENPC-203ENST00000506882 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms