RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
SCLT1-207ENST00000506233 AEBP2Q6ZN18 517 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-207ENST00000506233 NISCHQ9Y2I1 1504 aa13.86□□□□□ -0.19
SCLT1-207ENST00000506233 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
SCLT1-207ENST00000506233 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
SCLT1-207ENST00000506233 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
SCLT1-207ENST00000506233 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
SCLT1-207ENST00000506233 KCNA4P22459 653 aa12.1□□□□□ -0.47
SCLT1-207ENST00000506233 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
SCLT1-207ENST00000506233 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
SCLT1-207ENST00000506233 ADRA2BP18089 450 aa11.8□□□□□ -0.52
SCLT1-207ENST00000506233 ZCCHC6Q5VYS8 1495 aaKnown RBP11.76□□□□□ -0.53
SCLT1-207ENST00000506233 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
SCLT1-207ENST00000506233 DCAF1Q9Y4B6 1507 aa11.52□□□□□ -0.57
SCLT1-207ENST00000506233 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
SCLT1-207ENST00000506233 SENP3Q9H4L4 574 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-207ENST00000506233 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
SCLT1-207ENST00000506233 ZBTB22O15209 634 aa11.3□□□□□ -0.6
SCLT1-207ENST00000506233 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
SCLT1-207ENST00000506233 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-207ENST00000506233 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
SCLT1-207ENST00000506233 ABCC9O60706 1549 aa11.07□□□□□ -0.64
SCLT1-207ENST00000506233 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
SCLT1-207ENST00000506233 NACADO15069 1562 aa11.02□□□□□ -0.65
SCLT1-207ENST00000506233 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
SCLT1-207ENST00000506233 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
SCLT1-207ENST00000506233 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.66
SCLT1-207ENST00000506233 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
SCLT1-207ENST00000506233 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-207ENST00000506233 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
SCLT1-207ENST00000506233 NCBP3Q53F19 620 aaKnown RBP10.86□□□□□ -0.67
SCLT1-207ENST00000506233 CECR2Q9BXF3 1484 aa10.83□□□□□ -0.68
SCLT1-207ENST00000506233 RB1CC1Q8TDY2 1594 aa10.81□□□□□ -0.68
SCLT1-207ENST00000506233 RSF1Q96T23 1441 aaPredicted RBP10.79□□□□□ -0.68
SCLT1-207ENST00000506233 MROH2BQ7Z745 1585 aa10.79□□□□□ -0.68
SCLT1-207ENST00000506233 FOXD1Q16676 465 aa10.78□□□□□ -0.68
SCLT1-207ENST00000506233 WIZO95785 1651 aa10.77□□□□□ -0.69
SCLT1-207ENST00000506233 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
SCLT1-207ENST00000506233 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
SCLT1-207ENST00000506233 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
SCLT1-207ENST00000506233 FKBP8Q14318 412 aa10.63□□□□□ -0.71
SCLT1-207ENST00000506233 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
SCLT1-207ENST00000506233 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
SCLT1-207ENST00000506233 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
SCLT1-207ENST00000506233 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.72
SCLT1-207ENST00000506233 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
SCLT1-207ENST00000506233 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
SCLT1-207ENST00000506233 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
SCLT1-207ENST00000506233 TIMELESSQ9UNS1 1208 aa10.41□□□□□ -0.74
SCLT1-207ENST00000506233 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
SCLT1-207ENST00000506233 BCANQ96GW7 911 aa10.37□□□□□ -0.75
SCLT1-207ENST00000506233 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
SCLT1-207ENST00000506233 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-207ENST00000506233 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-207ENST00000506233 ATAD2BQ9ULI0 1458 aa10.34□□□□□ -0.75
SCLT1-207ENST00000506233 PIAS4Q8N2W9 510 aaPredicted RBP10.33□□□□□ -0.76
SCLT1-207ENST00000506233 CNKSR2Q8WXI2 1034 aa10.31□□□□□ -0.76
SCLT1-207ENST00000506233 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
SCLT1-207ENST00000506233 PRDM2Q13029 1718 aa10.28□□□□□ -0.76
SCLT1-207ENST00000506233 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
SCLT1-207ENST00000506233 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
SCLT1-207ENST00000506233 SYNJ1O43426 1573 aa10.25□□□□□ -0.77
SCLT1-207ENST00000506233 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
SCLT1-207ENST00000506233 NCAPD3P42695 1498 aa10.21□□□□□ -0.78
SCLT1-207ENST00000506233 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
SCLT1-207ENST00000506233 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
SCLT1-207ENST00000506233 FBLN2P98095 1184 aa10.15□□□□□ -0.78
SCLT1-207ENST00000506233 CC2D2AQ9P2K1 1620 aa10.15□□□□□ -0.78
SCLT1-207ENST00000506233 RUSC2Q8N2Y8 1516 aa10.15□□□□□ -0.78
SCLT1-207ENST00000506233 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.78
SCLT1-207ENST00000506233 SLC4A2P04920 1241 aa10.15□□□□□ -0.78
SCLT1-207ENST00000506233 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
SCLT1-207ENST00000506233 BAZ1BQ9UIG0 1483 aaKnown RBP10.09□□□□□ -0.79
SCLT1-207ENST00000506233 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
SCLT1-207ENST00000506233 CUX1P39880 1505 aa10.07□□□□□ -0.8
SCLT1-207ENST00000506233 ARXQ96QS3 562 aa10.06□□□□□ -0.8
SCLT1-207ENST00000506233 CFTRP13569 1480 aa10.06□□□□□ -0.8
SCLT1-207ENST00000506233 SOGA1O94964 1423 aa10.05□□□□□ -0.8
SCLT1-207ENST00000506233 LOC105371045A0A1W2PR82 267 aa10.05□□□□□ -0.8
SCLT1-207ENST00000506233 MAPK8IP2Q13387 824 aaPredicted RBP10.05□□□□□ -0.8
SCLT1-207ENST00000506233 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
SCLT1-207ENST00000506233 KIF21BO75037 1637 aa9.97□□□□□ -0.81
SCLT1-207ENST00000506233 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
SCLT1-207ENST00000506233 ATXN8OSP0DMR3 200 aa9.94□□□□□ -0.82
SCLT1-207ENST00000506233 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
SCLT1-207ENST00000506233 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
SCLT1-207ENST00000506233 PKD2Q13563 968 aa9.92□□□□□ -0.82
SCLT1-207ENST00000506233 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
SCLT1-207ENST00000506233 NESP48681 1621 aa9.9□□□□□ -0.82
SCLT1-207ENST00000506233 RNF216Q9NWF9 866 aaPredicted RBP9.87□□□□□ -0.83
SCLT1-207ENST00000506233 PRXQ9BXM0 1461 aa9.87□□□□□ -0.83
SCLT1-207ENST00000506233 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
SCLT1-207ENST00000506233 MYCNP04198 464 aaPredicted RBP9.85□□□□□ -0.83
SCLT1-207ENST00000506233 LRRIQ1Q96JM4 1722 aa9.84□□□□□ -0.83
SCLT1-207ENST00000506233 TARBP1Q13395 1621 aaKnown RBP9.84□□□□□ -0.83
SCLT1-207ENST00000506233 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
SCLT1-207ENST00000506233 SCAF1Q9H7N4 1312 aaKnown RBP9.84□□□□□ -0.83
SCLT1-207ENST00000506233 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
SCLT1-207ENST00000506233 ABCA5Q8WWZ7 1642 aa9.83□□□□□ -0.84
SCLT1-207ENST00000506233 RAPGEF2Q9Y4G8 1499 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms