RNA–Protein interactions for RNA: ENST00000505280.1

SEC24D-207, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-207ENST00000505280 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
SEC24D-207ENST00000505280 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
SEC24D-207ENST00000505280 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
SEC24D-207ENST00000505280 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
SEC24D-207ENST00000505280 SENP3Q9H4L4 574 aaPredicted RBP24.59■■□□□ 1.53
SEC24D-207ENST00000505280 FOXD1Q16676 465 aa22.9■■□□□ 1.26
SEC24D-207ENST00000505280 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
SEC24D-207ENST00000505280 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
SEC24D-207ENST00000505280 ADRA2BP18089 450 aa21.95■■□□□ 1.1
SEC24D-207ENST00000505280 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
SEC24D-207ENST00000505280 PIAS4Q8N2W9 510 aaPredicted RBP21.54■■□□□ 1.04
SEC24D-207ENST00000505280 ABCC9O60706 1549 aa21.21■□□□□ 0.99
SEC24D-207ENST00000505280 MSH5O43196 834 aa21.08■□□□□ 0.97
SEC24D-207ENST00000505280 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SEC24D-207ENST00000505280 NACADO15069 1562 aa20.48■□□□□ 0.87
SEC24D-207ENST00000505280 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
SEC24D-207ENST00000505280 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
SEC24D-207ENST00000505280 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
SEC24D-207ENST00000505280 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
SEC24D-207ENST00000505280 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
SEC24D-207ENST00000505280 SCRIBQ14160 1630 aa20.02■□□□□ 0.79
SEC24D-207ENST00000505280 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
SEC24D-207ENST00000505280 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
SEC24D-207ENST00000505280 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
SEC24D-207ENST00000505280 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
SEC24D-207ENST00000505280 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
SEC24D-207ENST00000505280 SHROOM4Q9ULL8 1493 aa19.68■□□□□ 0.74
SEC24D-207ENST00000505280 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
SEC24D-207ENST00000505280 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
SEC24D-207ENST00000505280 KCNA4P22459 653 aa19.55■□□□□ 0.72
SEC24D-207ENST00000505280 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
SEC24D-207ENST00000505280 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
SEC24D-207ENST00000505280 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
SEC24D-207ENST00000505280 NPM3O75607 178 aaKnown RBP19.29■□□□□ 0.68
SEC24D-207ENST00000505280 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
SEC24D-207ENST00000505280 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
SEC24D-207ENST00000505280 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
SEC24D-207ENST00000505280 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
SEC24D-207ENST00000505280 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
SEC24D-207ENST00000505280 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
SEC24D-207ENST00000505280 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
SEC24D-207ENST00000505280 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
SEC24D-207ENST00000505280 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
SEC24D-207ENST00000505280 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
SEC24D-207ENST00000505280 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
SEC24D-207ENST00000505280 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
SEC24D-207ENST00000505280 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
SEC24D-207ENST00000505280 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
SEC24D-207ENST00000505280 WIZO95785 1651 aa18.86■□□□□ 0.61
SEC24D-207ENST00000505280 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
SEC24D-207ENST00000505280 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
SEC24D-207ENST00000505280 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
SEC24D-207ENST00000505280 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
SEC24D-207ENST00000505280 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
SEC24D-207ENST00000505280 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
SEC24D-207ENST00000505280 NESP48681 1621 aa18.45■□□□□ 0.54
SEC24D-207ENST00000505280 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
SEC24D-207ENST00000505280 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
SEC24D-207ENST00000505280 CFTRP13569 1480 aa18.33■□□□□ 0.52
SEC24D-207ENST00000505280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
SEC24D-207ENST00000505280 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
SEC24D-207ENST00000505280 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
SEC24D-207ENST00000505280 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
SEC24D-207ENST00000505280 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
SEC24D-207ENST00000505280 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
SEC24D-207ENST00000505280 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
SEC24D-207ENST00000505280 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
SEC24D-207ENST00000505280 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
SEC24D-207ENST00000505280 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
SEC24D-207ENST00000505280 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
SEC24D-207ENST00000505280 WDR62O43379 1518 aa18.03■□□□□ 0.48
SEC24D-207ENST00000505280 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.47
SEC24D-207ENST00000505280 ZBTB22O15209 634 aa18■□□□□ 0.47
SEC24D-207ENST00000505280 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
SEC24D-207ENST00000505280 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
SEC24D-207ENST00000505280 CUX2O14529 1486 aa17.96■□□□□ 0.47
SEC24D-207ENST00000505280 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
SEC24D-207ENST00000505280 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
SEC24D-207ENST00000505280 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
SEC24D-207ENST00000505280 CUX1P39880 1505 aa17.9■□□□□ 0.46
SEC24D-207ENST00000505280 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
SEC24D-207ENST00000505280 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
SEC24D-207ENST00000505280 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
SEC24D-207ENST00000505280 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
SEC24D-207ENST00000505280 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
SEC24D-207ENST00000505280 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
SEC24D-207ENST00000505280 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
SEC24D-207ENST00000505280 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
SEC24D-207ENST00000505280 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
SEC24D-207ENST00000505280 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
SEC24D-207ENST00000505280 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
SEC24D-207ENST00000505280 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
SEC24D-207ENST00000505280 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
SEC24D-207ENST00000505280 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
SEC24D-207ENST00000505280 ZNF608Q9ULD9 1512 aaPredicted RBP17.68■□□□□ 0.42
SEC24D-207ENST00000505280 SOGA1O94964 1423 aa17.66■□□□□ 0.42
SEC24D-207ENST00000505280 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
SEC24D-207ENST00000505280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
SEC24D-207ENST00000505280 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
SEC24D-207ENST00000505280 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms