RNA–Protein interactions for RNA: ENST00000505030.5

LINC00461-204, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best)

Gene LINC00461, Length 3,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-204ENST00000505030 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
LINC00461-204ENST00000505030 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
LINC00461-204ENST00000505030 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
LINC00461-204ENST00000505030 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
LINC00461-204ENST00000505030 ABCC9O60706 1549 aa13.44□□□□□ -0.26
LINC00461-204ENST00000505030 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
LINC00461-204ENST00000505030 NACADO15069 1562 aa13.2□□□□□ -0.3
LINC00461-204ENST00000505030 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
LINC00461-204ENST00000505030 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.32
LINC00461-204ENST00000505030 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
LINC00461-204ENST00000505030 SHROOM4Q9ULL8 1493 aa12.73□□□□□ -0.37
LINC00461-204ENST00000505030 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
LINC00461-204ENST00000505030 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00461-204ENST00000505030 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
LINC00461-204ENST00000505030 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
LINC00461-204ENST00000505030 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
LINC00461-204ENST00000505030 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
LINC00461-204ENST00000505030 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
LINC00461-204ENST00000505030 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
LINC00461-204ENST00000505030 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
LINC00461-204ENST00000505030 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
LINC00461-204ENST00000505030 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
LINC00461-204ENST00000505030 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
LINC00461-204ENST00000505030 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
LINC00461-204ENST00000505030 WIZO95785 1651 aa12.18□□□□□ -0.46
LINC00461-204ENST00000505030 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
LINC00461-204ENST00000505030 HMGXB3Q12766 1538 aa12.14□□□□□ -0.47
LINC00461-204ENST00000505030 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
LINC00461-204ENST00000505030 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
LINC00461-204ENST00000505030 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
LINC00461-204ENST00000505030 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
LINC00461-204ENST00000505030 CC2D2AQ9P2K1 1620 aa11.95□□□□□ -0.5
LINC00461-204ENST00000505030 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
LINC00461-204ENST00000505030 CHIC1Q5VXU3 224 aa11.89□□□□□ -0.51
LINC00461-204ENST00000505030 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
LINC00461-204ENST00000505030 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
LINC00461-204ENST00000505030 CFTRP13569 1480 aa11.8□□□□□ -0.52
LINC00461-204ENST00000505030 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
LINC00461-204ENST00000505030 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
LINC00461-204ENST00000505030 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
LINC00461-204ENST00000505030 EEA1Q15075 1411 aa11.74□□□□□ -0.53
LINC00461-204ENST00000505030 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
LINC00461-204ENST00000505030 CUX2O14529 1486 aa11.69□□□□□ -0.54
LINC00461-204ENST00000505030 ABCC8Q09428 1581 aa11.69□□□□□ -0.54
LINC00461-204ENST00000505030 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
LINC00461-204ENST00000505030 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
LINC00461-204ENST00000505030 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
LINC00461-204ENST00000505030 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
LINC00461-204ENST00000505030 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
LINC00461-204ENST00000505030 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
LINC00461-204ENST00000505030 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
LINC00461-204ENST00000505030 CUX1P39880 1505 aa11.53□□□□□ -0.56
LINC00461-204ENST00000505030 WDR97A6NE52 1622 aa11.48□□□□□ -0.57
LINC00461-204ENST00000505030 KIF21BO75037 1637 aa11.48□□□□□ -0.57
LINC00461-204ENST00000505030 KIF27Q86VH2 1401 aa11.47□□□□□ -0.57
LINC00461-204ENST00000505030 HRCP23327 699 aa11.46□□□□□ -0.57
LINC00461-204ENST00000505030 TOPBP1Q92547 1522 aa11.46□□□□□ -0.58
LINC00461-204ENST00000505030 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
LINC00461-204ENST00000505030 CSRNP3Q8WYN3 585 aa11.45□□□□□ -0.58
LINC00461-204ENST00000505030 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
LINC00461-204ENST00000505030 NESP48681 1621 aa11.43□□□□□ -0.58
LINC00461-204ENST00000505030 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
LINC00461-204ENST00000505030 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
LINC00461-204ENST00000505030 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
LINC00461-204ENST00000505030 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
LINC00461-204ENST00000505030 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
LINC00461-204ENST00000505030 SOGA1O94964 1423 aa11.39□□□□□ -0.59
LINC00461-204ENST00000505030 WDR62O43379 1518 aa11.39□□□□□ -0.59
LINC00461-204ENST00000505030 TNIKQ9UKE5 1360 aa11.39□□□□□ -0.59
LINC00461-204ENST00000505030 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
LINC00461-204ENST00000505030 CUL7Q14999 1698 aa11.37□□□□□ -0.59
LINC00461-204ENST00000505030 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
LINC00461-204ENST00000505030 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
LINC00461-204ENST00000505030 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
LINC00461-204ENST00000505030 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
LINC00461-204ENST00000505030 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
LINC00461-204ENST00000505030 THOC2Q8NI27 1593 aaKnown RBP11.3□□□□□ -0.6
LINC00461-204ENST00000505030 FAM9AQ8IZU1 332 aaPredicted RBP11.3□□□□□ -0.6
LINC00461-204ENST00000505030 TARBP1Q13395 1621 aaKnown RBP11.3□□□□□ -0.6
LINC00461-204ENST00000505030 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
LINC00461-204ENST00000505030 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
LINC00461-204ENST00000505030 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
LINC00461-204ENST00000505030 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
LINC00461-204ENST00000505030 IGF1RP08069 1367 aa11.26□□□□□ -0.61
LINC00461-204ENST00000505030 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
LINC00461-204ENST00000505030 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
LINC00461-204ENST00000505030 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
LINC00461-204ENST00000505030 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
LINC00461-204ENST00000505030 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
LINC00461-204ENST00000505030 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
LINC00461-204ENST00000505030 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
LINC00461-204ENST00000505030 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
LINC00461-204ENST00000505030 FBLN2P98095 1184 aa11.22□□□□□ -0.61
LINC00461-204ENST00000505030 AEBP2Q6ZN18 517 aaPredicted RBP11.22□□□□□ -0.61
LINC00461-204ENST00000505030 FHAD1B1AJZ9 1412 aa11.19□□□□□ -0.62
LINC00461-204ENST00000505030 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
LINC00461-204ENST00000505030 MAGI1Q96QZ7 1491 aaPredicted RBP11.18□□□□□ -0.62
LINC00461-204ENST00000505030 CLIP1P30622 1438 aa11.17□□□□□ -0.62
LINC00461-204ENST00000505030 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
LINC00461-204ENST00000505030 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms