RNA–Protein interactions for RNA: ENST00000503968.1

HIPK1-209, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 4

Gene HIPK1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-209ENST00000503968 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
HIPK1-209ENST00000503968 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
HIPK1-209ENST00000503968 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
HIPK1-209ENST00000503968 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
HIPK1-209ENST00000503968 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
HIPK1-209ENST00000503968 FOXD1Q16676 465 aa17.99■□□□□ 0.47
HIPK1-209ENST00000503968 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.38
HIPK1-209ENST00000503968 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
HIPK1-209ENST00000503968 ADRA2BP18089 450 aa16.89■□□□□ 0.29
HIPK1-209ENST00000503968 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
HIPK1-209ENST00000503968 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
HIPK1-209ENST00000503968 MSH5O43196 834 aa16.81■□□□□ 0.28
HIPK1-209ENST00000503968 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
HIPK1-209ENST00000503968 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
HIPK1-209ENST00000503968 ABCC9O60706 1549 aa16.39■□□□□ 0.21
HIPK1-209ENST00000503968 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
HIPK1-209ENST00000503968 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
HIPK1-209ENST00000503968 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
HIPK1-209ENST00000503968 NACADO15069 1562 aa16.18■□□□□ 0.18
HIPK1-209ENST00000503968 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
HIPK1-209ENST00000503968 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
HIPK1-209ENST00000503968 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
HIPK1-209ENST00000503968 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
HIPK1-209ENST00000503968 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
HIPK1-209ENST00000503968 BICRAQ9NZM4 1560 aa15.48■□□□□ 0.07
HIPK1-209ENST00000503968 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
HIPK1-209ENST00000503968 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
HIPK1-209ENST00000503968 SUPT5HO00267 1087 aaKnown RBP15.35■□□□□ 0.05
HIPK1-209ENST00000503968 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
HIPK1-209ENST00000503968 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
HIPK1-209ENST00000503968 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
HIPK1-209ENST00000503968 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
HIPK1-209ENST00000503968 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
HIPK1-209ENST00000503968 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
HIPK1-209ENST00000503968 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
HIPK1-209ENST00000503968 WIZO95785 1651 aa15.12■□□□□ 0.01
HIPK1-209ENST00000503968 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
HIPK1-209ENST00000503968 PEG3Q9GZU2 1588 aa15.08■□□□□ 0
HIPK1-209ENST00000503968 SMARCA2P51531 1590 aa15.05■□□□□ -0
HIPK1-209ENST00000503968 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
HIPK1-209ENST00000503968 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
HIPK1-209ENST00000503968 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
HIPK1-209ENST00000503968 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
HIPK1-209ENST00000503968 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
HIPK1-209ENST00000503968 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
HIPK1-209ENST00000503968 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
HIPK1-209ENST00000503968 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
HIPK1-209ENST00000503968 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
HIPK1-209ENST00000503968 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
HIPK1-209ENST00000503968 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
HIPK1-209ENST00000503968 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
HIPK1-209ENST00000503968 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
HIPK1-209ENST00000503968 CFTRP13569 1480 aa14.52□□□□□ -0.08
HIPK1-209ENST00000503968 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
HIPK1-209ENST00000503968 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
HIPK1-209ENST00000503968 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
HIPK1-209ENST00000503968 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
HIPK1-209ENST00000503968 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
HIPK1-209ENST00000503968 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
HIPK1-209ENST00000503968 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
HIPK1-209ENST00000503968 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
HIPK1-209ENST00000503968 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
HIPK1-209ENST00000503968 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
HIPK1-209ENST00000503968 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
HIPK1-209ENST00000503968 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
HIPK1-209ENST00000503968 NESP48681 1621 aa14.33□□□□□ -0.12
HIPK1-209ENST00000503968 RNF39Q9H2S5 420 aa14.32□□□□□ -0.12
HIPK1-209ENST00000503968 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
HIPK1-209ENST00000503968 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
HIPK1-209ENST00000503968 CUX1P39880 1505 aa14.26□□□□□ -0.13
HIPK1-209ENST00000503968 KCNA4P22459 653 aa14.26□□□□□ -0.13
HIPK1-209ENST00000503968 EEA1Q15075 1411 aa14.24□□□□□ -0.13
HIPK1-209ENST00000503968 DNMBPQ6XZF7 1577 aa14.24□□□□□ -0.13
HIPK1-209ENST00000503968 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
HIPK1-209ENST00000503968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.14
HIPK1-209ENST00000503968 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
HIPK1-209ENST00000503968 FAM9AQ8IZU1 332 aaPredicted RBP14.16□□□□□ -0.14
HIPK1-209ENST00000503968 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
HIPK1-209ENST00000503968 SOGA1O94964 1423 aa14.15□□□□□ -0.14
HIPK1-209ENST00000503968 ERCC6Q03468 1493 aa14.14□□□□□ -0.15
HIPK1-209ENST00000503968 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
HIPK1-209ENST00000503968 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
HIPK1-209ENST00000503968 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
HIPK1-209ENST00000503968 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
HIPK1-209ENST00000503968 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
HIPK1-209ENST00000503968 WDR62O43379 1518 aa14.07□□□□□ -0.16
HIPK1-209ENST00000503968 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
HIPK1-209ENST00000503968 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
HIPK1-209ENST00000503968 CUX2O14529 1486 aa14.06□□□□□ -0.16
HIPK1-209ENST00000503968 KIF21BO75037 1637 aa14.04□□□□□ -0.16
HIPK1-209ENST00000503968 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
HIPK1-209ENST00000503968 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
HIPK1-209ENST00000503968 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
HIPK1-209ENST00000503968 GOLGA3Q08378 1498 aa14.02□□□□□ -0.16
HIPK1-209ENST00000503968 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
HIPK1-209ENST00000503968 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
HIPK1-209ENST00000503968 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
HIPK1-209ENST00000503968 IFT140Q96RY7 1462 aa13.96□□□□□ -0.17
HIPK1-209ENST00000503968 TARBP1Q13395 1621 aaKnown RBP13.96□□□□□ -0.17
HIPK1-209ENST00000503968 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms