RNA–Protein interactions for RNA: ENST00000503424.1

COMMD10-202, Transcript of COMM domain containing 10, humanhuman

TSL 5

Gene COMMD10, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD10-202ENST00000503424 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
COMMD10-202ENST00000503424 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
COMMD10-202ENST00000503424 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
COMMD10-202ENST00000503424 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
COMMD10-202ENST00000503424 FOXD1Q16676 465 aa15.88■□□□□ 0.13
COMMD10-202ENST00000503424 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
COMMD10-202ENST00000503424 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
COMMD10-202ENST00000503424 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
COMMD10-202ENST00000503424 MSH5O43196 834 aa14.72□□□□□ -0.05
COMMD10-202ENST00000503424 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
COMMD10-202ENST00000503424 ADRA2BP18089 450 aa14.7□□□□□ -0.06
COMMD10-202ENST00000503424 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
COMMD10-202ENST00000503424 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
COMMD10-202ENST00000503424 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
COMMD10-202ENST00000503424 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
COMMD10-202ENST00000503424 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
COMMD10-202ENST00000503424 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
COMMD10-202ENST00000503424 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
COMMD10-202ENST00000503424 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
COMMD10-202ENST00000503424 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
COMMD10-202ENST00000503424 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
COMMD10-202ENST00000503424 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
COMMD10-202ENST00000503424 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
COMMD10-202ENST00000503424 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
COMMD10-202ENST00000503424 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
COMMD10-202ENST00000503424 ABCC9O60706 1549 aa12.33□□□□□ -0.44
COMMD10-202ENST00000503424 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
COMMD10-202ENST00000503424 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
COMMD10-202ENST00000503424 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
COMMD10-202ENST00000503424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
COMMD10-202ENST00000503424 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.49
COMMD10-202ENST00000503424 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
COMMD10-202ENST00000503424 KCNA4P22459 653 aa11.94□□□□□ -0.5
COMMD10-202ENST00000503424 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
COMMD10-202ENST00000503424 DCAF1Q9Y4B6 1507 aa11.87□□□□□ -0.51
COMMD10-202ENST00000503424 NACADO15069 1562 aa11.85□□□□□ -0.51
COMMD10-202ENST00000503424 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
COMMD10-202ENST00000503424 MYO15BQ96JP2 1530 aa11.83□□□□□ -0.52
COMMD10-202ENST00000503424 DSG3P32926 999 aa11.83□□□□□ -0.52
COMMD10-202ENST00000503424 CAPN15O75808 1086 aa11.79□□□□□ -0.52
COMMD10-202ENST00000503424 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
COMMD10-202ENST00000503424 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
COMMD10-202ENST00000503424 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
COMMD10-202ENST00000503424 ABCB7O75027 752 aa11.6□□□□□ -0.55
COMMD10-202ENST00000503424 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
COMMD10-202ENST00000503424 SCRIBQ14160 1630 aa11.58□□□□□ -0.56
COMMD10-202ENST00000503424 POTEHQ6S545 545 aa11.56□□□□□ -0.56
COMMD10-202ENST00000503424 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
COMMD10-202ENST00000503424 ZNF219Q9P2Y4 722 aaPredicted RBP11.44□□□□□ -0.58
COMMD10-202ENST00000503424 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
COMMD10-202ENST00000503424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
COMMD10-202ENST00000503424 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
COMMD10-202ENST00000503424 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
COMMD10-202ENST00000503424 APLP2Q06481 763 aa11.32□□□□□ -0.6
COMMD10-202ENST00000503424 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
COMMD10-202ENST00000503424 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
COMMD10-202ENST00000503424 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
COMMD10-202ENST00000503424 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
COMMD10-202ENST00000503424 POLA2Q14181 598 aa11.23□□□□□ -0.61
COMMD10-202ENST00000503424 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
COMMD10-202ENST00000503424 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
COMMD10-202ENST00000503424 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
COMMD10-202ENST00000503424 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
COMMD10-202ENST00000503424 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
COMMD10-202ENST00000503424 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
COMMD10-202ENST00000503424 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
COMMD10-202ENST00000503424 ZBTB22O15209 634 aa11.07□□□□□ -0.64
COMMD10-202ENST00000503424 CHRDL2Q6WN34 429 aa11.06□□□□□ -0.64
COMMD10-202ENST00000503424 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
COMMD10-202ENST00000503424 SMARCA4P51532 1647 aa11.06□□□□□ -0.64
COMMD10-202ENST00000503424 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
COMMD10-202ENST00000503424 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
COMMD10-202ENST00000503424 SMARCA2P51531 1590 aa10.98□□□□□ -0.65
COMMD10-202ENST00000503424 WIZO95785 1651 aa10.97□□□□□ -0.65
COMMD10-202ENST00000503424 BAZ1BQ9UIG0 1483 aaKnown RBP10.96□□□□□ -0.65
COMMD10-202ENST00000503424 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
COMMD10-202ENST00000503424 PEG3Q9GZU2 1588 aa10.92□□□□□ -0.66
COMMD10-202ENST00000503424 CCDC88BA6NC98 1476 aa10.88□□□□□ -0.67
COMMD10-202ENST00000503424 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
COMMD10-202ENST00000503424 REM2Q8IYK8 340 aaPredicted RBP10.87□□□□□ -0.67
COMMD10-202ENST00000503424 TOP2AP11388 1531 aaKnown RBP10.85□□□□□ -0.67
COMMD10-202ENST00000503424 HMGXB3Q12766 1538 aa10.85□□□□□ -0.67
COMMD10-202ENST00000503424 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
COMMD10-202ENST00000503424 CADPSQ9ULU8 1353 aa10.8□□□□□ -0.68
COMMD10-202ENST00000503424 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
COMMD10-202ENST00000503424 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
COMMD10-202ENST00000503424 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
COMMD10-202ENST00000503424 NESP48681 1621 aa10.72□□□□□ -0.69
COMMD10-202ENST00000503424 CFTRP13569 1480 aa10.7□□□□□ -0.7
COMMD10-202ENST00000503424 FXR2P51116 673 aaKnown RBP eCLIP10.69□□□□□ -0.7
COMMD10-202ENST00000503424 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
COMMD10-202ENST00000503424 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
COMMD10-202ENST00000503424 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
COMMD10-202ENST00000503424 EVX2Q03828 476 aa10.65□□□□□ -0.7
COMMD10-202ENST00000503424 TRIM41Q8WV44 630 aa10.62□□□□□ -0.71
COMMD10-202ENST00000503424 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
COMMD10-202ENST00000503424 HAX1O00165 279 aa10.59□□□□□ -0.71
COMMD10-202ENST00000503424 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
COMMD10-202ENST00000503424 LAMC3Q9Y6N6 1575 aa10.57□□□□□ -0.72
COMMD10-202ENST00000503424 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms