RNA–Protein interactions for RNA: ENST00000503176.5

PDK2-203, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDK2, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-203ENST00000503176 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
PDK2-203ENST00000503176 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
PDK2-203ENST00000503176 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
PDK2-203ENST00000503176 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
PDK2-203ENST00000503176 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
PDK2-203ENST00000503176 HRCP23327 699 aa22.94■■□□□ 1.26
PDK2-203ENST00000503176 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
PDK2-203ENST00000503176 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
PDK2-203ENST00000503176 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
PDK2-203ENST00000503176 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
PDK2-203ENST00000503176 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.16
PDK2-203ENST00000503176 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
PDK2-203ENST00000503176 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
PDK2-203ENST00000503176 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
PDK2-203ENST00000503176 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
PDK2-203ENST00000503176 PELP1Q8IZL8 1130 aaKnown RBP21.75■■□□□ 1.07
PDK2-203ENST00000503176 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
PDK2-203ENST00000503176 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
PDK2-203ENST00000503176 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
PDK2-203ENST00000503176 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
PDK2-203ENST00000503176 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
PDK2-203ENST00000503176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
PDK2-203ENST00000503176 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
PDK2-203ENST00000503176 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
PDK2-203ENST00000503176 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
PDK2-203ENST00000503176 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
PDK2-203ENST00000503176 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
PDK2-203ENST00000503176 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
PDK2-203ENST00000503176 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
PDK2-203ENST00000503176 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
PDK2-203ENST00000503176 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
PDK2-203ENST00000503176 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
PDK2-203ENST00000503176 ABCC9O60706 1549 aa20.81■□□□□ 0.92
PDK2-203ENST00000503176 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
PDK2-203ENST00000503176 MYT1Q01538 1121 aa20.78■□□□□ 0.92
PDK2-203ENST00000503176 SCRIBQ14160 1630 aa20.77■□□□□ 0.92
PDK2-203ENST00000503176 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
PDK2-203ENST00000503176 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
PDK2-203ENST00000503176 MIER1Q8N108 512 aa20.62■□□□□ 0.89
PDK2-203ENST00000503176 APLP2Q06481 763 aa20.58■□□□□ 0.89
PDK2-203ENST00000503176 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
PDK2-203ENST00000503176 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
PDK2-203ENST00000503176 CEP162Q5TB80 1403 aa20.34■□□□□ 0.85
PDK2-203ENST00000503176 BCANQ96GW7 911 aa20.28■□□□□ 0.84
PDK2-203ENST00000503176 ITGAEP38570 1179 aa20.28■□□□□ 0.84
PDK2-203ENST00000503176 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
PDK2-203ENST00000503176 SOGA1O94964 1423 aa20.21■□□□□ 0.83
PDK2-203ENST00000503176 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
PDK2-203ENST00000503176 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDK2-203ENST00000503176 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
PDK2-203ENST00000503176 WIZO95785 1651 aa20.16■□□□□ 0.82
PDK2-203ENST00000503176 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.81
PDK2-203ENST00000503176 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.81
PDK2-203ENST00000503176 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
PDK2-203ENST00000503176 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PDK2-203ENST00000503176 NEFLP07196 543 aa19.95■□□□□ 0.78
PDK2-203ENST00000503176 CLIP1P30622 1438 aa19.93■□□□□ 0.78
PDK2-203ENST00000503176 FKBP8Q14318 412 aa19.93■□□□□ 0.78
PDK2-203ENST00000503176 ATP1B4Q9UN42 357 aaPredicted RBP19.92■□□□□ 0.78
PDK2-203ENST00000503176 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
PDK2-203ENST00000503176 KCNH8Q96L42 1107 aa19.89■□□□□ 0.77
PDK2-203ENST00000503176 TSHZ2Q9NRE2 1034 aa19.89■□□□□ 0.77
PDK2-203ENST00000503176 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
PDK2-203ENST00000503176 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
PDK2-203ENST00000503176 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
PDK2-203ENST00000503176 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
PDK2-203ENST00000503176 EEA1Q15075 1411 aa19.77■□□□□ 0.76
PDK2-203ENST00000503176 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
PDK2-203ENST00000503176 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
PDK2-203ENST00000503176 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
PDK2-203ENST00000503176 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
PDK2-203ENST00000503176 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
PDK2-203ENST00000503176 NACADO15069 1562 aa19.71■□□□□ 0.75
PDK2-203ENST00000503176 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
PDK2-203ENST00000503176 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
PDK2-203ENST00000503176 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
PDK2-203ENST00000503176 DHX57Q6P158 1386 aaKnown RBP19.65■□□□□ 0.74
PDK2-203ENST00000503176 IRX6P78412 446 aaPredicted RBP19.63■□□□□ 0.73
PDK2-203ENST00000503176 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
PDK2-203ENST00000503176 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
PDK2-203ENST00000503176 ANP32CO43423 234 aa19.59■□□□□ 0.73
PDK2-203ENST00000503176 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.73
PDK2-203ENST00000503176 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
PDK2-203ENST00000503176 CNGB1Q14028 1251 aaPredicted RBP19.56■□□□□ 0.72
PDK2-203ENST00000503176 P3H3Q8IVL6 736 aa19.56■□□□□ 0.72
PDK2-203ENST00000503176 RBM19Q9Y4C8 960 aaKnown RBP19.56■□□□□ 0.72
PDK2-203ENST00000503176 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
PDK2-203ENST00000503176 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDK2-203ENST00000503176 SMARCA4P51532 1647 aa19.45■□□□□ 0.7
PDK2-203ENST00000503176 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
PDK2-203ENST00000503176 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
PDK2-203ENST00000503176 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
PDK2-203ENST00000503176 KIF21BO75037 1637 aa19.37■□□□□ 0.69
PDK2-203ENST00000503176 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
PDK2-203ENST00000503176 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
PDK2-203ENST00000503176 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
PDK2-203ENST00000503176 TONSLQ96HA7 1378 aa19.27■□□□□ 0.67
PDK2-203ENST00000503176 FAM9BQ8IZU0 186 aa19.26■□□□□ 0.67
PDK2-203ENST00000503176 NBR1Q14596 966 aa19.25■□□□□ 0.67
PDK2-203ENST00000503176 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms