RNA–Protein interactions for RNA: ENST00000502855.1

ABLIM3-204, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 2

Gene ABLIM3, Length 778 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-204ENST00000502855 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
ABLIM3-204ENST00000502855 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
ABLIM3-204ENST00000502855 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
ABLIM3-204ENST00000502855 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
ABLIM3-204ENST00000502855 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
ABLIM3-204ENST00000502855 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
ABLIM3-204ENST00000502855 FOXD1Q16676 465 aa20.8■□□□□ 0.92
ABLIM3-204ENST00000502855 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
ABLIM3-204ENST00000502855 ADRA2BP18089 450 aa20.04■□□□□ 0.8
ABLIM3-204ENST00000502855 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
ABLIM3-204ENST00000502855 ABCC9O60706 1549 aa19.18■□□□□ 0.66
ABLIM3-204ENST00000502855 MSH5O43196 834 aa19.14■□□□□ 0.65
ABLIM3-204ENST00000502855 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
ABLIM3-204ENST00000502855 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
ABLIM3-204ENST00000502855 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
ABLIM3-204ENST00000502855 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
ABLIM3-204ENST00000502855 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
ABLIM3-204ENST00000502855 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
ABLIM3-204ENST00000502855 NACADO15069 1562 aa18.16■□□□□ 0.5
ABLIM3-204ENST00000502855 KCNA4P22459 653 aa18.14■□□□□ 0.49
ABLIM3-204ENST00000502855 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
ABLIM3-204ENST00000502855 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
ABLIM3-204ENST00000502855 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
ABLIM3-204ENST00000502855 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
ABLIM3-204ENST00000502855 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
ABLIM3-204ENST00000502855 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
ABLIM3-204ENST00000502855 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
ABLIM3-204ENST00000502855 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
ABLIM3-204ENST00000502855 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
ABLIM3-204ENST00000502855 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
ABLIM3-204ENST00000502855 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
ABLIM3-204ENST00000502855 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
ABLIM3-204ENST00000502855 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
ABLIM3-204ENST00000502855 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
ABLIM3-204ENST00000502855 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
ABLIM3-204ENST00000502855 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
ABLIM3-204ENST00000502855 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
ABLIM3-204ENST00000502855 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
ABLIM3-204ENST00000502855 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
ABLIM3-204ENST00000502855 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
ABLIM3-204ENST00000502855 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
ABLIM3-204ENST00000502855 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
ABLIM3-204ENST00000502855 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
ABLIM3-204ENST00000502855 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
ABLIM3-204ENST00000502855 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
ABLIM3-204ENST00000502855 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
ABLIM3-204ENST00000502855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
ABLIM3-204ENST00000502855 ZBTB22O15209 634 aa16.69■□□□□ 0.26
ABLIM3-204ENST00000502855 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
ABLIM3-204ENST00000502855 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
ABLIM3-204ENST00000502855 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
ABLIM3-204ENST00000502855 SMARCA2P51531 1590 aa16.62■□□□□ 0.25
ABLIM3-204ENST00000502855 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
ABLIM3-204ENST00000502855 CUX2O14529 1486 aa16.61■□□□□ 0.25
ABLIM3-204ENST00000502855 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
ABLIM3-204ENST00000502855 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
ABLIM3-204ENST00000502855 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
ABLIM3-204ENST00000502855 NESP48681 1621 aa16.49■□□□□ 0.23
ABLIM3-204ENST00000502855 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
ABLIM3-204ENST00000502855 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
ABLIM3-204ENST00000502855 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
ABLIM3-204ENST00000502855 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
ABLIM3-204ENST00000502855 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
ABLIM3-204ENST00000502855 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
ABLIM3-204ENST00000502855 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
ABLIM3-204ENST00000502855 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
ABLIM3-204ENST00000502855 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
ABLIM3-204ENST00000502855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
ABLIM3-204ENST00000502855 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
ABLIM3-204ENST00000502855 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
ABLIM3-204ENST00000502855 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
ABLIM3-204ENST00000502855 WIZO95785 1651 aa16.18■□□□□ 0.18
ABLIM3-204ENST00000502855 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
ABLIM3-204ENST00000502855 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
ABLIM3-204ENST00000502855 MRC2Q9UBG0 1479 aa16.13■□□□□ 0.17
ABLIM3-204ENST00000502855 ATXN8OSP0DMR3 200 aa16.12■□□□□ 0.17
ABLIM3-204ENST00000502855 CFTRP13569 1480 aa16.11■□□□□ 0.17
ABLIM3-204ENST00000502855 WDR62O43379 1518 aa16.11■□□□□ 0.17
ABLIM3-204ENST00000502855 APLP2Q06481 763 aa16.07■□□□□ 0.16
ABLIM3-204ENST00000502855 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
ABLIM3-204ENST00000502855 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
ABLIM3-204ENST00000502855 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
ABLIM3-204ENST00000502855 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
ABLIM3-204ENST00000502855 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
ABLIM3-204ENST00000502855 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
ABLIM3-204ENST00000502855 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
ABLIM3-204ENST00000502855 CAPN15O75808 1086 aa15.9■□□□□ 0.14
ABLIM3-204ENST00000502855 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
ABLIM3-204ENST00000502855 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
ABLIM3-204ENST00000502855 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
ABLIM3-204ENST00000502855 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
ABLIM3-204ENST00000502855 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
ABLIM3-204ENST00000502855 IFT140Q96RY7 1462 aa15.77■□□□□ 0.11
ABLIM3-204ENST00000502855 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
ABLIM3-204ENST00000502855 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
ABLIM3-204ENST00000502855 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
ABLIM3-204ENST00000502855 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
ABLIM3-204ENST00000502855 DSG3P32926 999 aa15.65■□□□□ 0.1
ABLIM3-204ENST00000502855 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
ABLIM3-204ENST00000502855 POLA2Q14181 598 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms