RNA–Protein interactions for RNA: ENST00000500085.2

FAT1-202, Transcript of FAT atypical cadherin 1, humanhuman

TSL 2

Gene FAT1, Length 2,224 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-202ENST00000500085 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
FAT1-202ENST00000500085 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
FAT1-202ENST00000500085 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.33
FAT1-202ENST00000500085 SHROOM4Q9ULL8 1493 aa23.25■■□□□ 1.31
FAT1-202ENST00000500085 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
FAT1-202ENST00000500085 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
FAT1-202ENST00000500085 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
FAT1-202ENST00000500085 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
FAT1-202ENST00000500085 ABCC9O60706 1549 aa22.16■■□□□ 1.14
FAT1-202ENST00000500085 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
FAT1-202ENST00000500085 NACADO15069 1562 aa22.03■■□□□ 1.12
FAT1-202ENST00000500085 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
FAT1-202ENST00000500085 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
FAT1-202ENST00000500085 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
FAT1-202ENST00000500085 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.05
FAT1-202ENST00000500085 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
FAT1-202ENST00000500085 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
FAT1-202ENST00000500085 WIZO95785 1651 aa21.37■■□□□ 1.01
FAT1-202ENST00000500085 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
FAT1-202ENST00000500085 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
FAT1-202ENST00000500085 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
FAT1-202ENST00000500085 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
FAT1-202ENST00000500085 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
FAT1-202ENST00000500085 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
FAT1-202ENST00000500085 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
FAT1-202ENST00000500085 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
FAT1-202ENST00000500085 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
FAT1-202ENST00000500085 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
FAT1-202ENST00000500085 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
FAT1-202ENST00000500085 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
FAT1-202ENST00000500085 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
FAT1-202ENST00000500085 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
FAT1-202ENST00000500085 EHMT2Q96KQ7 1210 aa20.7■□□□□ 0.9
FAT1-202ENST00000500085 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
FAT1-202ENST00000500085 HRCP23327 699 aa20.69■□□□□ 0.9
FAT1-202ENST00000500085 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
FAT1-202ENST00000500085 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
FAT1-202ENST00000500085 SOGA1O94964 1423 aa20.48■□□□□ 0.87
FAT1-202ENST00000500085 WRNQ14191 1432 aaPredicted RBP eCLIP20.47■□□□□ 0.87
FAT1-202ENST00000500085 EEA1Q15075 1411 aa20.4■□□□□ 0.86
FAT1-202ENST00000500085 RUSC2Q8N2Y8 1516 aa20.39■□□□□ 0.85
FAT1-202ENST00000500085 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
FAT1-202ENST00000500085 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
FAT1-202ENST00000500085 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
FAT1-202ENST00000500085 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
FAT1-202ENST00000500085 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
FAT1-202ENST00000500085 CEP162Q5TB80 1403 aa20.26■□□□□ 0.83
FAT1-202ENST00000500085 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
FAT1-202ENST00000500085 GOLGA3Q08378 1498 aa20.22■□□□□ 0.83
FAT1-202ENST00000500085 UBTFP17480 764 aaKnown RBP20.2■□□□□ 0.82
FAT1-202ENST00000500085 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
FAT1-202ENST00000500085 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
FAT1-202ENST00000500085 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
FAT1-202ENST00000500085 KIF21BO75037 1637 aa20.14■□□□□ 0.82
FAT1-202ENST00000500085 CFTRP13569 1480 aa20.11■□□□□ 0.81
FAT1-202ENST00000500085 CUX1P39880 1505 aa20.05■□□□□ 0.8
FAT1-202ENST00000500085 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
FAT1-202ENST00000500085 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.79
FAT1-202ENST00000500085 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
FAT1-202ENST00000500085 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
FAT1-202ENST00000500085 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
FAT1-202ENST00000500085 CLIP1P30622 1438 aa19.95■□□□□ 0.78
FAT1-202ENST00000500085 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
FAT1-202ENST00000500085 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
FAT1-202ENST00000500085 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
FAT1-202ENST00000500085 KIF27Q86VH2 1401 aa19.87■□□□□ 0.77
FAT1-202ENST00000500085 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
FAT1-202ENST00000500085 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
FAT1-202ENST00000500085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
FAT1-202ENST00000500085 CCER1Q8TC90 406 aaPredicted RBP19.75■□□□□ 0.75
FAT1-202ENST00000500085 CUX2O14529 1486 aa19.73■□□□□ 0.75
FAT1-202ENST00000500085 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
FAT1-202ENST00000500085 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
FAT1-202ENST00000500085 APLP2Q06481 763 aa19.7■□□□□ 0.74
FAT1-202ENST00000500085 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
FAT1-202ENST00000500085 IGF1RP08069 1367 aa19.67■□□□□ 0.74
FAT1-202ENST00000500085 NESP48681 1621 aa19.66■□□□□ 0.74
FAT1-202ENST00000500085 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
FAT1-202ENST00000500085 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.73
FAT1-202ENST00000500085 TOPBP1Q92547 1522 aa19.58■□□□□ 0.72
FAT1-202ENST00000500085 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
FAT1-202ENST00000500085 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
FAT1-202ENST00000500085 POLA1P09884 1462 aaPredicted RBP19.55■□□□□ 0.72
FAT1-202ENST00000500085 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
FAT1-202ENST00000500085 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
FAT1-202ENST00000500085 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
FAT1-202ENST00000500085 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
FAT1-202ENST00000500085 KANK4Q5T7N3 995 aaPredicted RBP19.48■□□□□ 0.71
FAT1-202ENST00000500085 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
FAT1-202ENST00000500085 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
FAT1-202ENST00000500085 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
FAT1-202ENST00000500085 CUL7Q14999 1698 aa19.38■□□□□ 0.69
FAT1-202ENST00000500085 KIF21AQ7Z4S6 1674 aa19.37■□□□□ 0.69
FAT1-202ENST00000500085 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
FAT1-202ENST00000500085 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
FAT1-202ENST00000500085 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
FAT1-202ENST00000500085 TDRD9Q8NDG6 1382 aaKnown RBP19.31■□□□□ 0.68
FAT1-202ENST00000500085 MAP3K1Q13233 1512 aa19.31■□□□□ 0.68
FAT1-202ENST00000500085 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
FAT1-202ENST00000500085 CTTNBP2Q8WZ74 1663 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms