RNA–Protein interactions for RNA: ENST00000497355.5

FOXP1-215, Transcript of forkhead box P1, humanhuman

TSL 1 (best)

Gene FOXP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-215ENST00000497355 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
FOXP1-215ENST00000497355 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
FOXP1-215ENST00000497355 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
FOXP1-215ENST00000497355 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
FOXP1-215ENST00000497355 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
FOXP1-215ENST00000497355 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
FOXP1-215ENST00000497355 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
FOXP1-215ENST00000497355 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
FOXP1-215ENST00000497355 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
FOXP1-215ENST00000497355 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
FOXP1-215ENST00000497355 SCRIBQ14160 1630 aa13.02□□□□□ -0.32
FOXP1-215ENST00000497355 ABCC9O60706 1549 aa13□□□□□ -0.33
FOXP1-215ENST00000497355 NACADO15069 1562 aa12.97□□□□□ -0.33
FOXP1-215ENST00000497355 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
FOXP1-215ENST00000497355 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
FOXP1-215ENST00000497355 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
FOXP1-215ENST00000497355 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
FOXP1-215ENST00000497355 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
FOXP1-215ENST00000497355 WIZO95785 1651 aa12.64□□□□□ -0.39
FOXP1-215ENST00000497355 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
FOXP1-215ENST00000497355 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
FOXP1-215ENST00000497355 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
FOXP1-215ENST00000497355 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
FOXP1-215ENST00000497355 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
FOXP1-215ENST00000497355 BICRAQ9NZM4 1560 aa12.44□□□□□ -0.42
FOXP1-215ENST00000497355 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
FOXP1-215ENST00000497355 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
FOXP1-215ENST00000497355 HRCP23327 699 aa12.39□□□□□ -0.43
FOXP1-215ENST00000497355 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
FOXP1-215ENST00000497355 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
FOXP1-215ENST00000497355 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
FOXP1-215ENST00000497355 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
FOXP1-215ENST00000497355 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
FOXP1-215ENST00000497355 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
FOXP1-215ENST00000497355 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
FOXP1-215ENST00000497355 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
FOXP1-215ENST00000497355 EHMT2Q96KQ7 1210 aa12.2□□□□□ -0.46
FOXP1-215ENST00000497355 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
FOXP1-215ENST00000497355 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
FOXP1-215ENST00000497355 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
FOXP1-215ENST00000497355 SOGA1O94964 1423 aa12.1□□□□□ -0.47
FOXP1-215ENST00000497355 EEA1Q15075 1411 aa12.07□□□□□ -0.48
FOXP1-215ENST00000497355 RUSC2Q8N2Y8 1516 aa12.07□□□□□ -0.48
FOXP1-215ENST00000497355 WRNQ14191 1432 aaPredicted RBP eCLIP12.06□□□□□ -0.48
FOXP1-215ENST00000497355 SYNJ1O43426 1573 aa12.04□□□□□ -0.48
FOXP1-215ENST00000497355 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
FOXP1-215ENST00000497355 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.48
FOXP1-215ENST00000497355 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
FOXP1-215ENST00000497355 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
FOXP1-215ENST00000497355 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
FOXP1-215ENST00000497355 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
FOXP1-215ENST00000497355 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
FOXP1-215ENST00000497355 GOLGA3Q08378 1498 aa11.96□□□□□ -0.5
FOXP1-215ENST00000497355 KIF21BO75037 1637 aa11.95□□□□□ -0.5
FOXP1-215ENST00000497355 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
FOXP1-215ENST00000497355 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
FOXP1-215ENST00000497355 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
FOXP1-215ENST00000497355 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
FOXP1-215ENST00000497355 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
FOXP1-215ENST00000497355 CFTRP13569 1480 aa11.83□□□□□ -0.52
FOXP1-215ENST00000497355 CUX1P39880 1505 aa11.82□□□□□ -0.52
FOXP1-215ENST00000497355 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
FOXP1-215ENST00000497355 CLIP1P30622 1438 aa11.79□□□□□ -0.52
FOXP1-215ENST00000497355 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
FOXP1-215ENST00000497355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
FOXP1-215ENST00000497355 POTEDQ86YR6 584 aa11.77□□□□□ -0.53
FOXP1-215ENST00000497355 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
FOXP1-215ENST00000497355 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
FOXP1-215ENST00000497355 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
FOXP1-215ENST00000497355 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
FOXP1-215ENST00000497355 CCER1Q8TC90 406 aaPredicted RBP11.73□□□□□ -0.53
FOXP1-215ENST00000497355 KIF27Q86VH2 1401 aa11.71□□□□□ -0.53
FOXP1-215ENST00000497355 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
FOXP1-215ENST00000497355 RANGAP1P46060 587 aaPredicted RBP11.65□□□□□ -0.54
FOXP1-215ENST00000497355 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
FOXP1-215ENST00000497355 APLP2Q06481 763 aa11.63□□□□□ -0.55
FOXP1-215ENST00000497355 CUX2O14529 1486 aa11.61□□□□□ -0.55
FOXP1-215ENST00000497355 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
FOXP1-215ENST00000497355 IGF1RP08069 1367 aa11.6□□□□□ -0.55
FOXP1-215ENST00000497355 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
FOXP1-215ENST00000497355 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
FOXP1-215ENST00000497355 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
FOXP1-215ENST00000497355 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
FOXP1-215ENST00000497355 CARMIL1Q5VZK9 1371 aa11.54□□□□□ -0.56
FOXP1-215ENST00000497355 NESP48681 1621 aa11.53□□□□□ -0.56
FOXP1-215ENST00000497355 KANK4Q5T7N3 995 aaPredicted RBP11.53□□□□□ -0.56
FOXP1-215ENST00000497355 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
FOXP1-215ENST00000497355 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
FOXP1-215ENST00000497355 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
FOXP1-215ENST00000497355 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
FOXP1-215ENST00000497355 FOXD1Q16676 465 aa11.49□□□□□ -0.57
FOXP1-215ENST00000497355 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
FOXP1-215ENST00000497355 RRBP1Q9P2E9 1410 aaKnown RBP11.47□□□□□ -0.57
FOXP1-215ENST00000497355 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
FOXP1-215ENST00000497355 MAP3K1Q13233 1512 aa11.46□□□□□ -0.58
FOXP1-215ENST00000497355 CUL7Q14999 1698 aa11.45□□□□□ -0.58
FOXP1-215ENST00000497355 TIAM1Q13009 1591 aa11.44□□□□□ -0.58
FOXP1-215ENST00000497355 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
FOXP1-215ENST00000497355 URB2Q14146 1524 aaKnown RBP11.44□□□□□ -0.58
FOXP1-215ENST00000497355 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms