RNA–Protein interactions for RNA: ENST00000497292.1

NCOA3-205, Transcript of nuclear receptor coactivator 3, humanhuman

TSL 5

Gene NCOA3, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3-205ENST00000497292 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
NCOA3-205ENST00000497292 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
NCOA3-205ENST00000497292 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
NCOA3-205ENST00000497292 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
NCOA3-205ENST00000497292 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
NCOA3-205ENST00000497292 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
NCOA3-205ENST00000497292 FOXD1Q16676 465 aa22.28■■□□□ 1.16
NCOA3-205ENST00000497292 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
NCOA3-205ENST00000497292 ADRA2BP18089 450 aa21.56■■□□□ 1.04
NCOA3-205ENST00000497292 PIAS4Q8N2W9 510 aaPredicted RBP21.01■□□□□ 0.95
NCOA3-205ENST00000497292 MSH5O43196 834 aa20.4■□□□□ 0.86
NCOA3-205ENST00000497292 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
NCOA3-205ENST00000497292 PPP4R3CPQ6ZMV5 832 aa19.96■□□□□ 0.79
NCOA3-205ENST00000497292 KCNA4P22459 653 aa19.7■□□□□ 0.74
NCOA3-205ENST00000497292 ABCC9O60706 1549 aa19.66■□□□□ 0.74
NCOA3-205ENST00000497292 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
NCOA3-205ENST00000497292 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
NCOA3-205ENST00000497292 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
NCOA3-205ENST00000497292 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
NCOA3-205ENST00000497292 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
NCOA3-205ENST00000497292 NPM3O75607 178 aaKnown RBP19.21■□□□□ 0.67
NCOA3-205ENST00000497292 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
NCOA3-205ENST00000497292 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
NCOA3-205ENST00000497292 DCAF8L2P0C7V8 631 aa18.99■□□□□ 0.63
NCOA3-205ENST00000497292 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
NCOA3-205ENST00000497292 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
NCOA3-205ENST00000497292 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
NCOA3-205ENST00000497292 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
NCOA3-205ENST00000497292 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
NCOA3-205ENST00000497292 NACADO15069 1562 aa18.73■□□□□ 0.59
NCOA3-205ENST00000497292 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
NCOA3-205ENST00000497292 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
NCOA3-205ENST00000497292 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
NCOA3-205ENST00000497292 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
NCOA3-205ENST00000497292 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
NCOA3-205ENST00000497292 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
NCOA3-205ENST00000497292 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
NCOA3-205ENST00000497292 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
NCOA3-205ENST00000497292 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
NCOA3-205ENST00000497292 ZBTB22O15209 634 aa18.18■□□□□ 0.5
NCOA3-205ENST00000497292 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
NCOA3-205ENST00000497292 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
NCOA3-205ENST00000497292 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
NCOA3-205ENST00000497292 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
NCOA3-205ENST00000497292 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
NCOA3-205ENST00000497292 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
NCOA3-205ENST00000497292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.469e-11■■□□□ 11.6
NCOA3-205ENST00000497292 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
NCOA3-205ENST00000497292 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
NCOA3-205ENST00000497292 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
NCOA3-205ENST00000497292 WIZO95785 1651 aa17.76■□□□□ 0.43
NCOA3-205ENST00000497292 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
NCOA3-205ENST00000497292 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
NCOA3-205ENST00000497292 MYCNP04198 464 aaPredicted RBP17.7■□□□□ 0.42
NCOA3-205ENST00000497292 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
NCOA3-205ENST00000497292 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
NCOA3-205ENST00000497292 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
NCOA3-205ENST00000497292 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
NCOA3-205ENST00000497292 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
NCOA3-205ENST00000497292 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
NCOA3-205ENST00000497292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
NCOA3-205ENST00000497292 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
NCOA3-205ENST00000497292 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
NCOA3-205ENST00000497292 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
NCOA3-205ENST00000497292 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
NCOA3-205ENST00000497292 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.37
NCOA3-205ENST00000497292 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
NCOA3-205ENST00000497292 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
NCOA3-205ENST00000497292 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
NCOA3-205ENST00000497292 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
NCOA3-205ENST00000497292 APLP2Q06481 763 aa17.17■□□□□ 0.34
NCOA3-205ENST00000497292 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
NCOA3-205ENST00000497292 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
NCOA3-205ENST00000497292 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
NCOA3-205ENST00000497292 CAPN15O75808 1086 aa17.03■□□□□ 0.32
NCOA3-205ENST00000497292 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
NCOA3-205ENST00000497292 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
NCOA3-205ENST00000497292 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
NCOA3-205ENST00000497292 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
NCOA3-205ENST00000497292 NESP48681 1621 aa16.95■□□□□ 0.3
NCOA3-205ENST00000497292 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
NCOA3-205ENST00000497292 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
NCOA3-205ENST00000497292 CFTRP13569 1480 aa16.88■□□□□ 0.29
NCOA3-205ENST00000497292 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
NCOA3-205ENST00000497292 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
NCOA3-205ENST00000497292 CUX2O14529 1486 aa16.86■□□□□ 0.29
NCOA3-205ENST00000497292 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
NCOA3-205ENST00000497292 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
NCOA3-205ENST00000497292 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
NCOA3-205ENST00000497292 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
NCOA3-205ENST00000497292 ABCB7O75027 752 aa16.77■□□□□ 0.28
NCOA3-205ENST00000497292 POLA2Q14181 598 aa16.77■□□□□ 0.28
NCOA3-205ENST00000497292 DSG3P32926 999 aa16.76■□□□□ 0.27
NCOA3-205ENST00000497292 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
NCOA3-205ENST00000497292 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
NCOA3-205ENST00000497292 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
NCOA3-205ENST00000497292 CUX1P39880 1505 aa16.71■□□□□ 0.27
NCOA3-205ENST00000497292 EEA1Q15075 1411 aa16.69■□□□□ 0.26
NCOA3-205ENST00000497292 SOGA1O94964 1423 aa16.68■□□□□ 0.26
NCOA3-205ENST00000497292 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms