RNA–Protein interactions for RNA: ENST00000497020.1

AVL9-208, Transcript of AVL9 cell migration associated, humanhuman

TSL 5

Gene AVL9, Length 677 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AVL9-208ENST00000497020 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
AVL9-208ENST00000497020 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
AVL9-208ENST00000497020 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
AVL9-208ENST00000497020 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
AVL9-208ENST00000497020 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
AVL9-208ENST00000497020 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
AVL9-208ENST00000497020 FOXD1Q16676 465 aa11.48□□□□□ -0.57
AVL9-208ENST00000497020 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
AVL9-208ENST00000497020 ZCCHC6Q5VYS8 1495 aaKnown RBP11.15□□□□□ -0.62
AVL9-208ENST00000497020 ADRA2BP18089 450 aa11.08□□□□□ -0.64
AVL9-208ENST00000497020 EHMT2Q96KQ7 1210 aa11.07□□□□□ -0.64
AVL9-208ENST00000497020 KCNA4P22459 653 aa11.03□□□□□ -0.64
AVL9-208ENST00000497020 SHROOM4Q9ULL8 1493 aa10.97□□□□□ -0.65
AVL9-208ENST00000497020 PPP6R1Q9UPN7 881 aa10.91□□□□□ -0.66
AVL9-208ENST00000497020 DCAF1Q9Y4B6 1507 aa10.9□□□□□ -0.66
AVL9-208ENST00000497020 PIAS4Q8N2W9 510 aaPredicted RBP10.82□□□□□ -0.68
AVL9-208ENST00000497020 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
AVL9-208ENST00000497020 ABCC9O60706 1549 aa10.77□□□□□ -0.69
AVL9-208ENST00000497020 MSH5O43196 834 aa10.7□□□□□ -0.7
AVL9-208ENST00000497020 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
AVL9-208ENST00000497020 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
AVL9-208ENST00000497020 MYO15BQ96JP2 1530 aa10.6□□□□□ -0.71
AVL9-208ENST00000497020 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
AVL9-208ENST00000497020 PPP4R3CPQ6ZMV5 832 aa10.51□□□□□ -0.73
AVL9-208ENST00000497020 NCBP3Q53F19 620 aaKnown RBP10.41□□□□□ -0.74
AVL9-208ENST00000497020 NACADO15069 1562 aa10.37□□□□□ -0.75
AVL9-208ENST00000497020 RB1CC1Q8TDY2 1594 aa10.37□□□□□ -0.75
AVL9-208ENST00000497020 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
AVL9-208ENST00000497020 RSF1Q96T23 1441 aaPredicted RBP10.36□□□□□ -0.75
AVL9-208ENST00000497020 HRCP23327 699 aa10.34□□□□□ -0.75
AVL9-208ENST00000497020 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
AVL9-208ENST00000497020 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
AVL9-208ENST00000497020 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
AVL9-208ENST00000497020 ZBTB22O15209 634 aa10.18□□□□□ -0.78
AVL9-208ENST00000497020 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
AVL9-208ENST00000497020 LOC105371045A0A1W2PR82 267 aa10.14□□□□□ -0.79
AVL9-208ENST00000497020 CECR2Q9BXF3 1484 aa10.13□□□□□ -0.79
AVL9-208ENST00000497020 BAZ1AQ9NRL2 1556 aaPredicted RBP10.13□□□□□ -0.79
AVL9-208ENST00000497020 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
AVL9-208ENST00000497020 TRIM41Q8WV44 630 aa10.12□□□□□ -0.79
AVL9-208ENST00000497020 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
AVL9-208ENST00000497020 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
AVL9-208ENST00000497020 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
AVL9-208ENST00000497020 CNKSR2Q8WXI2 1034 aa10.07□□□□□ -0.8
AVL9-208ENST00000497020 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
AVL9-208ENST00000497020 WIZO95785 1651 aa10.06□□□□□ -0.8
AVL9-208ENST00000497020 TOP2AP11388 1531 aaKnown RBP10.03□□□□□ -0.8
AVL9-208ENST00000497020 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
AVL9-208ENST00000497020 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
AVL9-208ENST00000497020 SMARCA4P51532 1647 aa9.99□□□□□ -0.81
AVL9-208ENST00000497020 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
AVL9-208ENST00000497020 POTEDQ86YR6 584 aa9.94□□□□□ -0.82
AVL9-208ENST00000497020 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
AVL9-208ENST00000497020 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
AVL9-208ENST00000497020 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
AVL9-208ENST00000497020 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
AVL9-208ENST00000497020 FAM9AQ8IZU1 332 aaPredicted RBP9.9□□□□□ -0.82
AVL9-208ENST00000497020 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
AVL9-208ENST00000497020 CCDC88BA6NC98 1476 aa9.9□□□□□ -0.83
AVL9-208ENST00000497020 EEA1Q15075 1411 aa9.9□□□□□ -0.83
AVL9-208ENST00000497020 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
AVL9-208ENST00000497020 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
AVL9-208ENST00000497020 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
AVL9-208ENST00000497020 WRNQ14191 1432 aaPredicted RBP eCLIP9.86□□□□□ -0.83
AVL9-208ENST00000497020 ABCC8Q09428 1581 aa9.82□□□□□ -0.84
AVL9-208ENST00000497020 TNIKQ9UKE5 1360 aa9.8□□□□□ -0.84
AVL9-208ENST00000497020 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
AVL9-208ENST00000497020 CC2D2AQ9P2K1 1620 aa9.76□□□□□ -0.85
AVL9-208ENST00000497020 GOLGA3Q08378 1498 aa9.76□□□□□ -0.85
AVL9-208ENST00000497020 SOGA1O94964 1423 aa9.74□□□□□ -0.85
AVL9-208ENST00000497020 ATAD2BQ9ULI0 1458 aa9.72□□□□□ -0.85
AVL9-208ENST00000497020 KIF21BO75037 1637 aa9.71□□□□□ -0.85
AVL9-208ENST00000497020 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
AVL9-208ENST00000497020 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
AVL9-208ENST00000497020 BAZ1BQ9UIG0 1483 aaKnown RBP9.68□□□□□ -0.86
AVL9-208ENST00000497020 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
AVL9-208ENST00000497020 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
AVL9-208ENST00000497020 CCER1Q8TC90 406 aaPredicted RBP9.63□□□□□ -0.87
AVL9-208ENST00000497020 HOXD11P31277 338 aaPredicted RBP9.61□□□□□ -0.87
AVL9-208ENST00000497020 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
AVL9-208ENST00000497020 TOP2BQ02880 1626 aa9.6□□□□□ -0.87
AVL9-208ENST00000497020 UBTFP17480 764 aaKnown RBP9.6□□□□□ -0.87
AVL9-208ENST00000497020 CLIP1P30622 1438 aa9.59□□□□□ -0.87
AVL9-208ENST00000497020 VPS8Q8N3P4 1428 aa9.59□□□□□ -0.87
AVL9-208ENST00000497020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
AVL9-208ENST00000497020 BIVM-ERCC5R4GMW8 1640 aa9.59□□□□□ -0.87
AVL9-208ENST00000497020 ERICH3Q5RHP9 1530 aa9.57□□□□□ -0.88
AVL9-208ENST00000497020 FKBP8Q14318 412 aa9.57□□□□□ -0.88
AVL9-208ENST00000497020 NCAPD3P42695 1498 aa9.56□□□□□ -0.88
AVL9-208ENST00000497020 SLC4A2P04920 1241 aa9.56□□□□□ -0.88
AVL9-208ENST00000497020 ATXN8OSP0DMR3 200 aa9.55□□□□□ -0.88
AVL9-208ENST00000497020 RAPGEF2Q9Y4G8 1499 aa9.53□□□□□ -0.88
AVL9-208ENST00000497020 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
AVL9-208ENST00000497020 PELP1Q8IZL8 1130 aaKnown RBP9.5□□□□□ -0.89
AVL9-208ENST00000497020 CFTRP13569 1480 aa9.47□□□□□ -0.89
AVL9-208ENST00000497020 DIEXFQ68CQ4 756 aaKnown RBP9.47□□□□□ -0.89
AVL9-208ENST00000497020 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
AVL9-208ENST00000497020 CUX1P39880 1505 aa9.46□□□□□ -0.89
AVL9-208ENST00000497020 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
AVL9-208ENST00000497020 APLP2Q06481 763 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms