RNA–Protein interactions for RNA: ENST00000495920.5

ECHDC2-219, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-219ENST00000495920 NISCHQ9Y2I1 1504 aa47.97■■■■■ 5.27
ECHDC2-219ENST00000495920 CCDC180Q9P1Z9 1646 aa42.72■■■■■ 4.43
ECHDC2-219ENST00000495920 ABCC9O60706 1549 aa42.08■■■■■ 4.33
ECHDC2-219ENST00000495920 RB1CC1Q8TDY2 1594 aa40.38■■■■■ 4.05
ECHDC2-219ENST00000495920 NACADO15069 1562 aa40.32■■■■■ 4.05
ECHDC2-219ENST00000495920 MYO15BQ96JP2 1530 aa40.12■■■■■ 4.01
ECHDC2-219ENST00000495920 DCAF8L2P0C7V8 631 aa39.97■■■■□ 3.99
ECHDC2-219ENST00000495920 ZCCHC6Q5VYS8 1495 aaKnown RBP39.89■■■■□ 3.98
ECHDC2-219ENST00000495920 DCAF1Q9Y4B6 1507 aa39.78■■■■□ 3.96
ECHDC2-219ENST00000495920 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
ECHDC2-219ENST00000495920 PABPN1Q86U42 306 aaKnown RBP eCLIP39.29■■■■□ 3.882e-7■□□□□ 10.8
ECHDC2-219ENST00000495920 BICRAQ9NZM4 1560 aa39.25■■■■□ 3.87
ECHDC2-219ENST00000495920 DNAJC5BQ9UF47 199 aa39.12■■■■□ 3.85
ECHDC2-219ENST00000495920 SHROOM4Q9ULL8 1493 aa38.9■■■■□ 3.82
ECHDC2-219ENST00000495920 SCRIBQ14160 1630 aa38.83■■■■□ 3.81
ECHDC2-219ENST00000495920 EIF4G1Q04637 1599 aaKnown RBP38.19■■■■□ 3.7
ECHDC2-219ENST00000495920 CC2D2AQ9P2K1 1620 aa38.08■■■■□ 3.69
ECHDC2-219ENST00000495920 CECR2Q9BXF3 1484 aa37.92■■■■□ 3.66
ECHDC2-219ENST00000495920 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
ECHDC2-219ENST00000495920 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
ECHDC2-219ENST00000495920 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.55
ECHDC2-219ENST00000495920 BAZ1AQ9NRL2 1556 aaPredicted RBP37.16■■■■□ 3.54
ECHDC2-219ENST00000495920 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
ECHDC2-219ENST00000495920 PEG3Q9GZU2 1588 aa37.01■■■■□ 3.52
ECHDC2-219ENST00000495920 HMGXB3Q12766 1538 aa37■■■■□ 3.51
ECHDC2-219ENST00000495920 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
ECHDC2-219ENST00000495920 BAZ1BQ9UIG0 1483 aaKnown RBP36.77■■■■□ 3.48
ECHDC2-219ENST00000495920 RSF1Q96T23 1441 aaPredicted RBP36.44■■■■□ 3.42
ECHDC2-219ENST00000495920 WIZO95785 1651 aa36.41■■■■□ 3.42
ECHDC2-219ENST00000495920 NESP48681 1621 aa36.35■■■■□ 3.41
ECHDC2-219ENST00000495920 ERCC6Q03468 1493 aa36.25■■■■□ 3.39
ECHDC2-219ENST00000495920 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
ECHDC2-219ENST00000495920 CUX2O14529 1486 aa36.16■■■■□ 3.38
ECHDC2-219ENST00000495920 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
ECHDC2-219ENST00000495920 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
ECHDC2-219ENST00000495920 PDS5BQ9NTI5 1447 aa36.04■■■■□ 3.36
ECHDC2-219ENST00000495920 THOC2Q8NI27 1593 aaKnown RBP35.89■■■■□ 3.34
ECHDC2-219ENST00000495920 CFTRP13569 1480 aa35.88■■■■□ 3.33
ECHDC2-219ENST00000495920 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
ECHDC2-219ENST00000495920 CCDC88BA6NC98 1476 aa35.7■■■■□ 3.31
ECHDC2-219ENST00000495920 MRC2Q9UBG0 1479 aa35.66■■■■□ 3.3
ECHDC2-219ENST00000495920 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
ECHDC2-219ENST00000495920 CEP164Q9UPV0 1460 aa35.6■■■■□ 3.29
ECHDC2-219ENST00000495920 WDR62O43379 1518 aa35.59■■■■□ 3.29
ECHDC2-219ENST00000495920 DNAJC5Q9H3Z4 198 aa35.52■■■■□ 3.28
ECHDC2-219ENST00000495920 URB2Q14146 1524 aaKnown RBP35.34■■■■□ 3.25
ECHDC2-219ENST00000495920 PRDM2Q13029 1718 aa35.32■■■■□ 3.25
ECHDC2-219ENST00000495920 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
ECHDC2-219ENST00000495920 TOPBP1Q92547 1522 aa35.05■■■■□ 3.2
ECHDC2-219ENST00000495920 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
ECHDC2-219ENST00000495920 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
ECHDC2-219ENST00000495920 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
ECHDC2-219ENST00000495920 ZNF608Q9ULD9 1512 aaPredicted RBP34.78■■■■□ 3.16
ECHDC2-219ENST00000495920 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
ECHDC2-219ENST00000495920 TARBP1Q13395 1621 aaKnown RBP34.71■■■■□ 3.15
ECHDC2-219ENST00000495920 CUX1P39880 1505 aa34.65■■■■□ 3.14
ECHDC2-219ENST00000495920 SOGA1O94964 1423 aa34.58■■■■□ 3.13
ECHDC2-219ENST00000495920 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
ECHDC2-219ENST00000495920 EIF4G3O43432 1585 aaKnown RBP34.55■■■■□ 3.12
ECHDC2-219ENST00000495920 FGD5Q6ZNL6 1462 aa34.55■■■■□ 3.12
ECHDC2-219ENST00000495920 RAD54L2Q9Y4B4 1467 aa34.55■■■■□ 3.12
ECHDC2-219ENST00000495920 AQRO60306 1485 aaKnown RBP eCLIP34.54■■■■□ 3.123e-6■■□□□ 13.8
ECHDC2-219ENST00000495920 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
ECHDC2-219ENST00000495920 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
ECHDC2-219ENST00000495920 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
ECHDC2-219ENST00000495920 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
ECHDC2-219ENST00000495920 TOP2BQ02880 1626 aa34.26■■■■□ 3.07
ECHDC2-219ENST00000495920 BIVM-ERCC5R4GMW8 1640 aa34.22■■■■□ 3.07
ECHDC2-219ENST00000495920 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
ECHDC2-219ENST00000495920 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
ECHDC2-219ENST00000495920 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
ECHDC2-219ENST00000495920 SNAPC4Q5SXM2 1469 aa34.17■■■■□ 3.06
ECHDC2-219ENST00000495920 GAPVD1Q14C86 1478 aa34.16■■■■□ 3.06
ECHDC2-219ENST00000495920 ABCA5Q8WWZ7 1642 aa34.12■■■■□ 3.05
ECHDC2-219ENST00000495920 CHD1O14646 1710 aa34.09■■■■□ 3.05
ECHDC2-219ENST00000495920 SYNJ2O15056 1496 aa34.06■■■■□ 3.04
ECHDC2-219ENST00000495920 FBLN2P98095 1184 aa34.05■■■■□ 3.04
ECHDC2-219ENST00000495920 CHMP7Q8WUX9 453 aaPredicted RBP34■■■■□ 3.03
ECHDC2-219ENST00000495920 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
ECHDC2-219ENST00000495920 RIMBP3CA6NJZ7 1639 aa33.96■■■■□ 3.03
ECHDC2-219ENST00000495920 RIMBP3BA6NNM3 1639 aa33.96■■■■□ 3.03
ECHDC2-219ENST00000495920 RIMBP3Q9UFD9 1639 aa33.96■■■■□ 3.03
ECHDC2-219ENST00000495920 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
ECHDC2-219ENST00000495920 TRIM41Q8WV44 630 aa33.93■■■■□ 3.02
ECHDC2-219ENST00000495920 CLASP1Q7Z460 1538 aa33.91■■■■□ 3.02
ECHDC2-219ENST00000495920 ERICH3Q5RHP9 1530 aa33.85■■■■□ 3.01
ECHDC2-219ENST00000495920 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
ECHDC2-219ENST00000495920 ADAMTS12P58397 1594 aa33.78■■■■□ 3
ECHDC2-219ENST00000495920 GRIN2AQ12879 1464 aa33.77■■■■□ 3
ECHDC2-219ENST00000495920 NUP160Q12769 1436 aa33.72■■■□□ 2.99
ECHDC2-219ENST00000495920 ARAP1Q96P48 1450 aa33.7■■■□□ 2.99
ECHDC2-219ENST00000495920 CYB5RLQ6IPT4 315 aa33.65■■■□□ 2.98
ECHDC2-219ENST00000495920 IGF1RP08069 1367 aa33.62■■■□□ 2.97
ECHDC2-219ENST00000495920 KIF27Q86VH2 1401 aa33.6■■■□□ 2.97
ECHDC2-219ENST00000495920 CEP170Q5SW79 1584 aa33.59■■■□□ 2.97
ECHDC2-219ENST00000495920 SHROOM2Q13796 1616 aa33.45■■■□□ 2.95
ECHDC2-219ENST00000495920 CUL7Q14999 1698 aa33.37■■■□□ 2.93
ECHDC2-219ENST00000495920 ERCC6L2Q5T890 1561 aa33.35■■■□□ 2.93
ECHDC2-219ENST00000495920 CARMIL1Q5VZK9 1371 aa33.33■■■□□ 2.93
ECHDC2-219ENST00000495920 JPH4Q96JJ6 628 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms