RNA–Protein interactions for RNA: ENST00000495879.1

PTPRG-207, Transcript of protein tyrosine phosphatase, receptor type G, humanhuman

TSL 1 (best)

Gene PTPRG, Length 3,011 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Dendrite, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRG-207ENST00000495879 NISCHQ9Y2I1 1504 aa36.79■■■■□ 3.48
PTPRG-207ENST00000495879 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.82
PTPRG-207ENST00000495879 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
PTPRG-207ENST00000495879 DCAF8L2P0C7V8 631 aa31.36■■■□□ 2.61
PTPRG-207ENST00000495879 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.61
PTPRG-207ENST00000495879 CHIC1Q5VXU3 224 aa31.27■■■□□ 2.6
PTPRG-207ENST00000495879 HRCP23327 699 aa31.21■■■□□ 2.59
PTPRG-207ENST00000495879 PCGF6Q9BYE7 350 aa31.16■■■□□ 2.58
PTPRG-207ENST00000495879 ZCCHC6Q5VYS8 1495 aaKnown RBP31.15■■■□□ 2.58
PTPRG-207ENST00000495879 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
PTPRG-207ENST00000495879 LOC105371045A0A1W2PR82 267 aa30.72■■■□□ 2.51
PTPRG-207ENST00000495879 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
PTPRG-207ENST00000495879 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
PTPRG-207ENST00000495879 TRIM26Q12899 539 aaPredicted RBP30.05■■■□□ 2.4
PTPRG-207ENST00000495879 EHMT2Q96KQ7 1210 aa30■■■□□ 2.39
PTPRG-207ENST00000495879 FAM9AQ8IZU1 332 aaPredicted RBP29.93■■■□□ 2.38
PTPRG-207ENST00000495879 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
PTPRG-207ENST00000495879 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.31
PTPRG-207ENST00000495879 ABCC9O60706 1549 aa29.46■■■□□ 2.31
PTPRG-207ENST00000495879 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
PTPRG-207ENST00000495879 ZEB1P37275 1124 aaPredicted RBP29.41■■■□□ 2.3
PTPRG-207ENST00000495879 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
PTPRG-207ENST00000495879 SCAF1Q9H7N4 1312 aaKnown RBP29.3■■■□□ 2.28
PTPRG-207ENST00000495879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
PTPRG-207ENST00000495879 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
PTPRG-207ENST00000495879 CECR2Q9BXF3 1484 aa29.02■■■□□ 2.24
PTPRG-207ENST00000495879 CCER1Q8TC90 406 aaPredicted RBP28.96■■■□□ 2.23
PTPRG-207ENST00000495879 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
PTPRG-207ENST00000495879 PELP1Q8IZL8 1130 aaKnown RBP28.8■■■□□ 2.2
PTPRG-207ENST00000495879 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
PTPRG-207ENST00000495879 WIZO95785 1651 aa28.69■■■□□ 2.18
PTPRG-207ENST00000495879 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
PTPRG-207ENST00000495879 DIEXFQ68CQ4 756 aaKnown RBP28.61■■■□□ 2.17
PTPRG-207ENST00000495879 GTF3C3Q9Y5Q9 886 aa28.54■■■□□ 2.16
PTPRG-207ENST00000495879 ABCC8Q09428 1581 aa28.43■■■□□ 2.14
PTPRG-207ENST00000495879 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.14
PTPRG-207ENST00000495879 YTHDC1Q96MU7 727 aaKnown RBP28.35■■■□□ 2.13
PTPRG-207ENST00000495879 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
PTPRG-207ENST00000495879 CENPBP07199 599 aaPredicted RBP28.34■■■□□ 2.13
PTPRG-207ENST00000495879 NACADO15069 1562 aa28.33■■■□□ 2.13
PTPRG-207ENST00000495879 SOGA1O94964 1423 aa28.32■■■□□ 2.12
PTPRG-207ENST00000495879 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
PTPRG-207ENST00000495879 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
PTPRG-207ENST00000495879 EIF4G1Q04637 1599 aaKnown RBP28.21■■■□□ 2.11
PTPRG-207ENST00000495879 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
PTPRG-207ENST00000495879 HNRNPUL2Q1KMD3 747 aaKnown RBP28.18■■■□□ 2.1
PTPRG-207ENST00000495879 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
PTPRG-207ENST00000495879 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
PTPRG-207ENST00000495879 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
PTPRG-207ENST00000495879 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
PTPRG-207ENST00000495879 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
PTPRG-207ENST00000495879 MIER1Q8N108 512 aa28.02■■■□□ 2.08
PTPRG-207ENST00000495879 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
PTPRG-207ENST00000495879 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
PTPRG-207ENST00000495879 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
PTPRG-207ENST00000495879 SMARCA4P51532 1647 aa27.87■■■□□ 2.05
PTPRG-207ENST00000495879 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
PTPRG-207ENST00000495879 EEA1Q15075 1411 aa27.72■■■□□ 2.03
PTPRG-207ENST00000495879 APLP2Q06481 763 aa27.7■■■□□ 2.02
PTPRG-207ENST00000495879 CLIP1P30622 1438 aa27.67■■■□□ 2.02
PTPRG-207ENST00000495879 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
PTPRG-207ENST00000495879 SYNJ1O43426 1573 aa27.52■■■□□ 2
PTPRG-207ENST00000495879 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
PTPRG-207ENST00000495879 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
PTPRG-207ENST00000495879 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
PTPRG-207ENST00000495879 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
PTPRG-207ENST00000495879 ITGAEP38570 1179 aa27.36■■□□□ 1.97
PTPRG-207ENST00000495879 KIF21BO75037 1637 aa27.33■■□□□ 1.97
PTPRG-207ENST00000495879 MYT1Q01538 1121 aa27.32■■□□□ 1.96
PTPRG-207ENST00000495879 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
PTPRG-207ENST00000495879 SUPT16HQ9Y5B9 1047 aaKnown RBP27.24■■□□□ 1.95
PTPRG-207ENST00000495879 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
PTPRG-207ENST00000495879 KCNH8Q96L42 1107 aa27.19■■□□□ 1.94
PTPRG-207ENST00000495879 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
PTPRG-207ENST00000495879 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.94
PTPRG-207ENST00000495879 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
PTPRG-207ENST00000495879 BCANQ96GW7 911 aa27.05■■□□□ 1.92
PTPRG-207ENST00000495879 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
PTPRG-207ENST00000495879 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
PTPRG-207ENST00000495879 TSHZ2Q9NRE2 1034 aa26.95■■□□□ 1.9
PTPRG-207ENST00000495879 PRXQ9BXM0 1461 aa26.92■■□□□ 1.9
PTPRG-207ENST00000495879 TOP2BQ02880 1626 aa26.92■■□□□ 1.9
PTPRG-207ENST00000495879 HIRIP3Q9BW71 556 aaPredicted RBP26.91■■□□□ 1.9
PTPRG-207ENST00000495879 CCNB3Q8WWL7 1395 aa26.9■■□□□ 1.9
PTPRG-207ENST00000495879 DDX10Q13206 875 aaKnown RBP26.88■■□□□ 1.89
PTPRG-207ENST00000495879 SIN3AQ96ST3 1273 aa26.87■■□□□ 1.89
PTPRG-207ENST00000495879 RRBP1Q9P2E9 1410 aaKnown RBP26.85■■□□□ 1.89
PTPRG-207ENST00000495879 RAB3GAP2Q9H2M9 1393 aa26.83■■□□□ 1.89
PTPRG-207ENST00000495879 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
PTPRG-207ENST00000495879 FAM50AQ14320 339 aaKnown RBP26.79■■□□□ 1.88
PTPRG-207ENST00000495879 P3H3Q8IVL6 736 aa26.78■■□□□ 1.88
PTPRG-207ENST00000495879 FKBP8Q14318 412 aa26.77■■□□□ 1.88
PTPRG-207ENST00000495879 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
PTPRG-207ENST00000495879 ARHGAP35Q9NRY4 1499 aa26.76■■□□□ 1.87
PTPRG-207ENST00000495879 KIF27Q86VH2 1401 aa26.75■■□□□ 1.87
PTPRG-207ENST00000495879 CUX1P39880 1505 aa26.74■■□□□ 1.87
PTPRG-207ENST00000495879 BIVM-ERCC5R4GMW8 1640 aa26.69■■□□□ 1.86
PTPRG-207ENST00000495879 TRIM52Q96A61 297 aa26.69■■□□□ 1.86
PTPRG-207ENST00000495879 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
PTPRG-207ENST00000495879 CUX2O14529 1486 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms