RNA–Protein interactions for RNA: ENST00000495728.1

RPL35-205, Transcript of ribosomal protein L35, humanhuman

TSL 2

Gene RPL35, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-205ENST00000495728 NISCHQ9Y2I1 1504 aa39.6■■■■□ 3.93
RPL35-205ENST00000495728 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
RPL35-205ENST00000495728 ABCC9O60706 1549 aa34.94■■■■□ 3.18
RPL35-205ENST00000495728 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
RPL35-205ENST00000495728 NACADO15069 1562 aa33.34■■■□□ 2.93
RPL35-205ENST00000495728 DCAF8L2P0C7V8 631 aa33.22■■■□□ 2.91
RPL35-205ENST00000495728 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
RPL35-205ENST00000495728 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
RPL35-205ENST00000495728 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
RPL35-205ENST00000495728 PABPN1Q86U42 306 aaKnown RBP eCLIP32.63■■■□□ 2.81
RPL35-205ENST00000495728 UNC13AQ9UPW8 1703 aa32.62■■■□□ 2.81
RPL35-205ENST00000495728 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
RPL35-205ENST00000495728 BICRAQ9NZM4 1560 aa32.46■■■□□ 2.79
RPL35-205ENST00000495728 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
RPL35-205ENST00000495728 SHROOM4Q9ULL8 1493 aa32.11■■■□□ 2.73
RPL35-205ENST00000495728 EIF4G1Q04637 1599 aaKnown RBP31.63■■■□□ 2.65
RPL35-205ENST00000495728 CC2D2AQ9P2K1 1620 aa31.59■■■□□ 2.65
RPL35-205ENST00000495728 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
RPL35-205ENST00000495728 NCAPD3P42695 1498 aa30.82■■■□□ 2.52
RPL35-205ENST00000495728 SMARCA4P51532 1647 aa30.76■■■□□ 2.52
RPL35-205ENST00000495728 ATAD2BQ9ULI0 1458 aa30.76■■■□□ 2.51
RPL35-205ENST00000495728 BAZ1AQ9NRL2 1556 aaPredicted RBP30.69■■■□□ 2.5
RPL35-205ENST00000495728 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
RPL35-205ENST00000495728 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
RPL35-205ENST00000495728 PEG3Q9GZU2 1588 aa30.51■■■□□ 2.47
RPL35-205ENST00000495728 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
RPL35-205ENST00000495728 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
RPL35-205ENST00000495728 ERCC6Q03468 1493 aa30.13■■■□□ 2.41
RPL35-205ENST00000495728 NESP48681 1621 aa30.13■■■□□ 2.41
RPL35-205ENST00000495728 WIZO95785 1651 aa30.1■■■□□ 2.41
RPL35-205ENST00000495728 RSF1Q96T23 1441 aaPredicted RBP30.04■■■□□ 2.4
RPL35-205ENST00000495728 CUX2O14529 1486 aa30■■■□□ 2.39
RPL35-205ENST00000495728 LAMC3Q9Y6N6 1575 aa30■■■□□ 2.39
RPL35-205ENST00000495728 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.37
RPL35-205ENST00000495728 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
RPL35-205ENST00000495728 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
RPL35-205ENST00000495728 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
RPL35-205ENST00000495728 KIF21AQ7Z4S6 1674 aa29.7■■■□□ 2.35
RPL35-205ENST00000495728 CFTRP13569 1480 aa29.62■■■□□ 2.33
RPL35-205ENST00000495728 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
RPL35-205ENST00000495728 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
RPL35-205ENST00000495728 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
RPL35-205ENST00000495728 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
RPL35-205ENST00000495728 CCDC88BA6NC98 1476 aa29.48■■■□□ 2.31
RPL35-205ENST00000495728 WDR62O43379 1518 aa29.45■■■□□ 2.31
RPL35-205ENST00000495728 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
RPL35-205ENST00000495728 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
RPL35-205ENST00000495728 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
RPL35-205ENST00000495728 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
RPL35-205ENST00000495728 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
RPL35-205ENST00000495728 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
RPL35-205ENST00000495728 DNMBPQ6XZF7 1577 aa28.9■■■□□ 2.22
RPL35-205ENST00000495728 ZNF608Q9ULD9 1512 aaPredicted RBP28.8■■■□□ 2.2
RPL35-205ENST00000495728 OSCARQ8IYS5 282 aa28.73■■■□□ 2.19
RPL35-205ENST00000495728 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
RPL35-205ENST00000495728 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
RPL35-205ENST00000495728 SOGA1O94964 1423 aa28.62■■■□□ 2.17
RPL35-205ENST00000495728 CUX1P39880 1505 aa28.62■■■□□ 2.17
RPL35-205ENST00000495728 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
RPL35-205ENST00000495728 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.171e-11■■■■■ 75.8
RPL35-205ENST00000495728 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
RPL35-205ENST00000495728 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
RPL35-205ENST00000495728 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
RPL35-205ENST00000495728 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
RPL35-205ENST00000495728 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
RPL35-205ENST00000495728 FBLN2P98095 1184 aa28.32■■■□□ 2.12
RPL35-205ENST00000495728 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
RPL35-205ENST00000495728 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
RPL35-205ENST00000495728 CHD1O14646 1710 aa28.3■■■□□ 2.12
RPL35-205ENST00000495728 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
RPL35-205ENST00000495728 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
RPL35-205ENST00000495728 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
RPL35-205ENST00000495728 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
RPL35-205ENST00000495728 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
RPL35-205ENST00000495728 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
RPL35-205ENST00000495728 RIMBP3CA6NJZ7 1639 aa28.22■■■□□ 2.11
RPL35-205ENST00000495728 RIMBP3BA6NNM3 1639 aa28.22■■■□□ 2.11
RPL35-205ENST00000495728 RIMBP3Q9UFD9 1639 aa28.22■■■□□ 2.11
RPL35-205ENST00000495728 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
RPL35-205ENST00000495728 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
RPL35-205ENST00000495728 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
RPL35-205ENST00000495728 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
RPL35-205ENST00000495728 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
RPL35-205ENST00000495728 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
RPL35-205ENST00000495728 CLASP1Q7Z460 1538 aa28.07■■■□□ 2.08
RPL35-205ENST00000495728 CYB5RLQ6IPT4 315 aa28.01■■■□□ 2.07
RPL35-205ENST00000495728 ARAP1Q96P48 1450 aa27.95■■■□□ 2.07
RPL35-205ENST00000495728 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
RPL35-205ENST00000495728 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
RPL35-205ENST00000495728 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
RPL35-205ENST00000495728 FHAD1B1AJZ9 1412 aa27.93■■■□□ 2.06
RPL35-205ENST00000495728 NUP160Q12769 1436 aa27.86■■■□□ 2.05
RPL35-205ENST00000495728 CEP170Q5SW79 1584 aa27.79■■■□□ 2.04
RPL35-205ENST00000495728 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
RPL35-205ENST00000495728 IGF1RP08069 1367 aa27.74■■■□□ 2.03
RPL35-205ENST00000495728 SHROOM2Q13796 1616 aa27.65■■■□□ 2.02
RPL35-205ENST00000495728 ERCC6L2Q5T890 1561 aa27.63■■■□□ 2.01
RPL35-205ENST00000495728 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
RPL35-205ENST00000495728 CUL7Q14999 1698 aa27.57■■■□□ 2
RPL35-205ENST00000495728 CARMIL1Q5VZK9 1371 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms