RNA–Protein interactions for RNA: ENST00000495191.5

PRRT1-210, Transcript of proline rich transmembrane protein 1, humanhuman

TSL 2

Gene PRRT1, Length 2,782 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT1-210ENST00000495191 NISCHQ9Y2I1 1504 aa30.69■■■□□ 2.5
PRRT1-210ENST00000495191 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
PRRT1-210ENST00000495191 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
PRRT1-210ENST00000495191 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
PRRT1-210ENST00000495191 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
PRRT1-210ENST00000495191 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
PRRT1-210ENST00000495191 ABCC9O60706 1549 aa25.27■■□□□ 1.64
PRRT1-210ENST00000495191 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
PRRT1-210ENST00000495191 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
PRRT1-210ENST00000495191 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
PRRT1-210ENST00000495191 NACADO15069 1562 aa24.68■■□□□ 1.54
PRRT1-210ENST00000495191 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
PRRT1-210ENST00000495191 PCGF6Q9BYE7 350 aa24.48■■□□□ 1.51
PRRT1-210ENST00000495191 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
PRRT1-210ENST00000495191 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
PRRT1-210ENST00000495191 HRCP23327 699 aa24.29■■□□□ 1.48
PRRT1-210ENST00000495191 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
PRRT1-210ENST00000495191 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
PRRT1-210ENST00000495191 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
PRRT1-210ENST00000495191 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
PRRT1-210ENST00000495191 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
PRRT1-210ENST00000495191 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
PRRT1-210ENST00000495191 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
PRRT1-210ENST00000495191 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
PRRT1-210ENST00000495191 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
PRRT1-210ENST00000495191 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
PRRT1-210ENST00000495191 BAZ1AQ9NRL2 1556 aaPredicted RBP23.64■■□□□ 1.37
PRRT1-210ENST00000495191 WIZO95785 1651 aa23.64■■□□□ 1.37
PRRT1-210ENST00000495191 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
PRRT1-210ENST00000495191 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
PRRT1-210ENST00000495191 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
PRRT1-210ENST00000495191 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
PRRT1-210ENST00000495191 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
PRRT1-210ENST00000495191 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
PRRT1-210ENST00000495191 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
PRRT1-210ENST00000495191 PEG3Q9GZU2 1588 aa23.11■■□□□ 1.29
PRRT1-210ENST00000495191 SMARCA2P51531 1590 aa23.11■■□□□ 1.29
PRRT1-210ENST00000495191 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
PRRT1-210ENST00000495191 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
PRRT1-210ENST00000495191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
PRRT1-210ENST00000495191 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.27
PRRT1-210ENST00000495191 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
PRRT1-210ENST00000495191 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
PRRT1-210ENST00000495191 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
PRRT1-210ENST00000495191 HMGXB3Q12766 1538 aa22.76■■□□□ 1.23
PRRT1-210ENST00000495191 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
PRRT1-210ENST00000495191 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
PRRT1-210ENST00000495191 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
PRRT1-210ENST00000495191 SOGA1O94964 1423 aa22.57■■□□□ 1.2
PRRT1-210ENST00000495191 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
PRRT1-210ENST00000495191 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
PRRT1-210ENST00000495191 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
PRRT1-210ENST00000495191 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
PRRT1-210ENST00000495191 CFTRP13569 1480 aa22.43■■□□□ 1.18
PRRT1-210ENST00000495191 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
PRRT1-210ENST00000495191 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
PRRT1-210ENST00000495191 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
PRRT1-210ENST00000495191 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
PRRT1-210ENST00000495191 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
PRRT1-210ENST00000495191 MYT1Q01538 1121 aa22.38■■□□□ 1.17
PRRT1-210ENST00000495191 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
PRRT1-210ENST00000495191 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
PRRT1-210ENST00000495191 ACIN1Q9UKV3 1341 aaKnown RBP22.26■■□□□ 1.15
PRRT1-210ENST00000495191 NESP48681 1621 aa22.25■■□□□ 1.15
PRRT1-210ENST00000495191 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
PRRT1-210ENST00000495191 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
PRRT1-210ENST00000495191 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
PRRT1-210ENST00000495191 CUX1P39880 1505 aa22.23■■□□□ 1.15
PRRT1-210ENST00000495191 GTF3C3Q9Y5Q9 886 aa22.2■■□□□ 1.14
PRRT1-210ENST00000495191 EEA1Q15075 1411 aa22.18■■□□□ 1.14
PRRT1-210ENST00000495191 BIVM-ERCC5R4GMW8 1640 aa22.16■■□□□ 1.14
PRRT1-210ENST00000495191 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
PRRT1-210ENST00000495191 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
PRRT1-210ENST00000495191 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
PRRT1-210ENST00000495191 GOLGA3Q08378 1498 aa22.04■■□□□ 1.12
PRRT1-210ENST00000495191 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
PRRT1-210ENST00000495191 APLP2Q06481 763 aa22.02■■□□□ 1.12
PRRT1-210ENST00000495191 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
PRRT1-210ENST00000495191 MIER1Q8N108 512 aa21.98■■□□□ 1.11
PRRT1-210ENST00000495191 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
PRRT1-210ENST00000495191 CLIP1P30622 1438 aa21.96■■□□□ 1.11
PRRT1-210ENST00000495191 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
PRRT1-210ENST00000495191 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
PRRT1-210ENST00000495191 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
PRRT1-210ENST00000495191 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
PRRT1-210ENST00000495191 CUX2O14529 1486 aa21.91■■□□□ 1.1
PRRT1-210ENST00000495191 KIF21BO75037 1637 aa21.9■■□□□ 1.1
PRRT1-210ENST00000495191 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
PRRT1-210ENST00000495191 RAD54L2Q9Y4B4 1467 aa21.87■■□□□ 1.09
PRRT1-210ENST00000495191 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
PRRT1-210ENST00000495191 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
PRRT1-210ENST00000495191 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.09
PRRT1-210ENST00000495191 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
PRRT1-210ENST00000495191 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
PRRT1-210ENST00000495191 ITGAEP38570 1179 aa21.81■■□□□ 1.08
PRRT1-210ENST00000495191 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
PRRT1-210ENST00000495191 IGF1RP08069 1367 aa21.78■■□□□ 1.08
PRRT1-210ENST00000495191 VPS8Q8N3P4 1428 aa21.77■■□□□ 1.08
PRRT1-210ENST00000495191 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
PRRT1-210ENST00000495191 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms