RNA–Protein interactions for RNA: ENST00000494306.1

COX5B-204, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 2

Gene COX5B, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-204ENST00000494306 DDX3XO00571 662 aaKnown RBP eCLIP12.1□□□□□ -0.472e-35■□□□□ 8.3
COX5B-204ENST00000494306 LARP4Q71RC2 724 aaKnown RBP eCLIP11.02□□□□□ -0.651e-30■■■■■ 90.3
COX5B-204ENST00000494306 PABPC4Q13310 644 aaKnown RBP eCLIP15.08■□□□□ 02e-30■■■■■ 45.3
COX5B-204ENST00000494306 SF3B4Q15427 424 aaKnown RBP eCLIP11.19□□□□□ -0.621e-24■■■□□ 17
COX5B-204ENST00000494306 RPS3P23396 243 aaKnown RBP eCLIP11.6□□□□□ -0.553e-21■■■■■ 43.4
COX5B-204ENST00000494306 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.6□□□□□ -0.231e-20■■■■■ 41.3
COX5B-204ENST00000494306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.072e-20■■■■□ 19.5
COX5B-204ENST00000494306 DDX6P26196 483 aaKnown RBP eCLIP13.2□□□□□ -0.34e-20■□□□□ 8.7
COX5B-204ENST00000494306 SUB1P53999 127 aaKnown RBP eCLIP8.76□□□□□ -1.013e-14■□□□□ 8.8
COX5B-204ENST00000494306 EFTUD2Q15029 972 aaKnown RBP eCLIP11.29□□□□□ -0.63e-13■■□□□ 13.1
COX5B-204ENST00000494306 G3BP1Q13283 466 aaKnown RBP eCLIP15.05■□□□□ -02e-11■■□□□ 12.5
COX5B-204ENST00000494306 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.32□□□□□ -0.64e-11■■■■□ 19.6
COX5B-204ENST00000494306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.671e-10■□□□□ 9.5
COX5B-204ENST00000494306 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.222e-10■□□□□ 10
COX5B-204ENST00000494306 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.551e-8■■■■□ 24.3
COX5B-204ENST00000494306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.49■□□□□ 0.873e-8■□□□□ 9.4
COX5B-204ENST00000494306 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.774e-8■□□□□ 9.7
COX5B-204ENST00000494306 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.414e-7■□□□□ 11.1
COX5B-204ENST00000494306 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.698e-7■■□□□ 13.9
COX5B-204ENST00000494306 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■□□□□ 8.3
COX5B-204ENST00000494306 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.213e-6■□□□□ 8
COX5B-204ENST00000494306 SF3B1O75533 1304 aaKnown RBP eCLIP13.55□□□□□ -0.243e-6■■■■■ 137.9
COX5B-204ENST00000494306 PCBP1Q15365 356 aaKnown RBP eCLIP13.63□□□□□ -0.239e-6■□□□□ 9.7
Retrieved 23 of 23 RNA–protein pairs in 8.1 ms