RNA–Protein interactions for RNA: ENST00000490813.5

CEP170-216, Transcript of centrosomal protein 170, humanhuman

TSL 1 (best) BASIC

Gene CEP170, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP170-216ENST00000490813 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
CEP170-216ENST00000490813 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
CEP170-216ENST00000490813 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
CEP170-216ENST00000490813 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
CEP170-216ENST00000490813 FOXD1Q16676 465 aa15.57■□□□□ 0.08
CEP170-216ENST00000490813 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
CEP170-216ENST00000490813 PPP6R1Q9UPN7 881 aa14.53□□□□□ -0.08
CEP170-216ENST00000490813 MSH5O43196 834 aa14.5□□□□□ -0.09
CEP170-216ENST00000490813 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
CEP170-216ENST00000490813 ADRA2BP18089 450 aa14.47□□□□□ -0.09
CEP170-216ENST00000490813 NISCHQ9Y2I1 1504 aa14.41□□□□□ -0.1
CEP170-216ENST00000490813 POTEDQ86YR6 584 aa14.4□□□□□ -0.1
CEP170-216ENST00000490813 ABCC9O60706 1549 aa13.39□□□□□ -0.27
CEP170-216ENST00000490813 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
CEP170-216ENST00000490813 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
CEP170-216ENST00000490813 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.3
CEP170-216ENST00000490813 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
CEP170-216ENST00000490813 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
CEP170-216ENST00000490813 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
CEP170-216ENST00000490813 RB1CC1Q8TDY2 1594 aa12.7□□□□□ -0.38
CEP170-216ENST00000490813 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
CEP170-216ENST00000490813 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
CEP170-216ENST00000490813 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
CEP170-216ENST00000490813 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
CEP170-216ENST00000490813 NACADO15069 1562 aa12.52□□□□□ -0.4
CEP170-216ENST00000490813 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
CEP170-216ENST00000490813 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
CEP170-216ENST00000490813 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
CEP170-216ENST00000490813 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
CEP170-216ENST00000490813 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
CEP170-216ENST00000490813 MYO15BQ96JP2 1530 aa12.27□□□□□ -0.44
CEP170-216ENST00000490813 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
CEP170-216ENST00000490813 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
CEP170-216ENST00000490813 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.45
CEP170-216ENST00000490813 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
CEP170-216ENST00000490813 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
CEP170-216ENST00000490813 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
CEP170-216ENST00000490813 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
CEP170-216ENST00000490813 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
CEP170-216ENST00000490813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.48
CEP170-216ENST00000490813 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
CEP170-216ENST00000490813 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.5
CEP170-216ENST00000490813 KCNA4P22459 653 aa11.9□□□□□ -0.5
CEP170-216ENST00000490813 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
CEP170-216ENST00000490813 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
CEP170-216ENST00000490813 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
CEP170-216ENST00000490813 CUX2O14529 1486 aa11.8□□□□□ -0.52
CEP170-216ENST00000490813 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
CEP170-216ENST00000490813 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
CEP170-216ENST00000490813 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
CEP170-216ENST00000490813 CAPN15O75808 1086 aa11.65□□□□□ -0.54
CEP170-216ENST00000490813 DSG3P32926 999 aa11.62□□□□□ -0.55
CEP170-216ENST00000490813 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
CEP170-216ENST00000490813 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.57
CEP170-216ENST00000490813 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
CEP170-216ENST00000490813 ABCB7O75027 752 aa11.43□□□□□ -0.58
CEP170-216ENST00000490813 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
CEP170-216ENST00000490813 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
CEP170-216ENST00000490813 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
CEP170-216ENST00000490813 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
CEP170-216ENST00000490813 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
CEP170-216ENST00000490813 NESP48681 1621 aa11.35□□□□□ -0.59
CEP170-216ENST00000490813 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
CEP170-216ENST00000490813 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
CEP170-216ENST00000490813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
CEP170-216ENST00000490813 APLP2Q06481 763 aa11.33□□□□□ -0.6
CEP170-216ENST00000490813 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
CEP170-216ENST00000490813 BAZ1BQ9UIG0 1483 aaKnown RBP11.31□□□□□ -0.6
CEP170-216ENST00000490813 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
CEP170-216ENST00000490813 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
CEP170-216ENST00000490813 BAZ1AQ9NRL2 1556 aaPredicted RBP11.25□□□□□ -0.61
CEP170-216ENST00000490813 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
CEP170-216ENST00000490813 POTEHQ6S545 545 aa11.25□□□□□ -0.61
CEP170-216ENST00000490813 PEG3Q9GZU2 1588 aa11.24□□□□□ -0.61
CEP170-216ENST00000490813 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
CEP170-216ENST00000490813 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
CEP170-216ENST00000490813 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
CEP170-216ENST00000490813 CADPSQ9ULU8 1353 aa11.17□□□□□ -0.62
CEP170-216ENST00000490813 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
CEP170-216ENST00000490813 WDR62O43379 1518 aa11.16□□□□□ -0.62
CEP170-216ENST00000490813 POLA2Q14181 598 aa11.12□□□□□ -0.63
CEP170-216ENST00000490813 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
CEP170-216ENST00000490813 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
CEP170-216ENST00000490813 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
CEP170-216ENST00000490813 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
CEP170-216ENST00000490813 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.65
CEP170-216ENST00000490813 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.65
CEP170-216ENST00000490813 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.65
CEP170-216ENST00000490813 FANCD2Q9BXW9 1451 aa11.01□□□□□ -0.65
CEP170-216ENST00000490813 ZBTB22O15209 634 aa10.99□□□□□ -0.65
CEP170-216ENST00000490813 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
CEP170-216ENST00000490813 ARHGEF11O15085 1522 aa10.95□□□□□ -0.66
CEP170-216ENST00000490813 CFTRP13569 1480 aa10.95□□□□□ -0.66
CEP170-216ENST00000490813 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
CEP170-216ENST00000490813 URB2Q14146 1524 aaKnown RBP10.9□□□□□ -0.66
CEP170-216ENST00000490813 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
CEP170-216ENST00000490813 WIZO95785 1651 aa10.89□□□□□ -0.67
CEP170-216ENST00000490813 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
CEP170-216ENST00000490813 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
CEP170-216ENST00000490813 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms