RNA–Protein interactions for RNA: ENST00000490501.5

PRKRA-212, Transcript of protein activator of interferon induced protein kinase EIF2AK2, humanhuman

TSL 2

Gene PRKRA, Length 1,851 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRA-212ENST00000490501 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
PRKRA-212ENST00000490501 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
PRKRA-212ENST00000490501 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
PRKRA-212ENST00000490501 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
PRKRA-212ENST00000490501 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
PRKRA-212ENST00000490501 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
PRKRA-212ENST00000490501 FOXD1Q16676 465 aa14.93□□□□□ -0.02
PRKRA-212ENST00000490501 MSH5O43196 834 aa14.45□□□□□ -0.1
PRKRA-212ENST00000490501 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
PRKRA-212ENST00000490501 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
PRKRA-212ENST00000490501 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
PRKRA-212ENST00000490501 ABCC9O60706 1549 aa13.09□□□□□ -0.31
PRKRA-212ENST00000490501 ADRA2BP18089 450 aa13.08□□□□□ -0.32
PRKRA-212ENST00000490501 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
PRKRA-212ENST00000490501 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
PRKRA-212ENST00000490501 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.36
PRKRA-212ENST00000490501 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
PRKRA-212ENST00000490501 NACADO15069 1562 aa12.57□□□□□ -0.4
PRKRA-212ENST00000490501 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
PRKRA-212ENST00000490501 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
PRKRA-212ENST00000490501 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
PRKRA-212ENST00000490501 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
PRKRA-212ENST00000490501 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
PRKRA-212ENST00000490501 UNC13AQ9UPW8 1703 aa12.37□□□□□ -0.43
PRKRA-212ENST00000490501 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
PRKRA-212ENST00000490501 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRKRA-212ENST00000490501 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
PRKRA-212ENST00000490501 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
PRKRA-212ENST00000490501 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
PRKRA-212ENST00000490501 POTEHQ6S545 545 aa12.12□□□□□ -0.47
PRKRA-212ENST00000490501 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
PRKRA-212ENST00000490501 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
PRKRA-212ENST00000490501 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
PRKRA-212ENST00000490501 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
PRKRA-212ENST00000490501 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
PRKRA-212ENST00000490501 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
PRKRA-212ENST00000490501 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
PRKRA-212ENST00000490501 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
PRKRA-212ENST00000490501 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
PRKRA-212ENST00000490501 BAZ1AQ9NRL2 1556 aaPredicted RBP11.79□□□□□ -0.52
PRKRA-212ENST00000490501 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
PRKRA-212ENST00000490501 WIZO95785 1651 aa11.73□□□□□ -0.53
PRKRA-212ENST00000490501 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
PRKRA-212ENST00000490501 SUPT5HO00267 1087 aaKnown RBP11.68□□□□□ -0.54
PRKRA-212ENST00000490501 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
PRKRA-212ENST00000490501 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
PRKRA-212ENST00000490501 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
PRKRA-212ENST00000490501 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
PRKRA-212ENST00000490501 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
PRKRA-212ENST00000490501 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
PRKRA-212ENST00000490501 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
PRKRA-212ENST00000490501 CCDC88BA6NC98 1476 aa11.45□□□□□ -0.58
PRKRA-212ENST00000490501 NESP48681 1621 aa11.41□□□□□ -0.58
PRKRA-212ENST00000490501 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
PRKRA-212ENST00000490501 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
PRKRA-212ENST00000490501 CFTRP13569 1480 aa11.29□□□□□ -0.6
PRKRA-212ENST00000490501 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.6
PRKRA-212ENST00000490501 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
PRKRA-212ENST00000490501 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
PRKRA-212ENST00000490501 ERCC6Q03468 1493 aa11.21□□□□□ -0.62
PRKRA-212ENST00000490501 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
PRKRA-212ENST00000490501 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
PRKRA-212ENST00000490501 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
PRKRA-212ENST00000490501 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
PRKRA-212ENST00000490501 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
PRKRA-212ENST00000490501 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
PRKRA-212ENST00000490501 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
PRKRA-212ENST00000490501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.11□□□□□ -0.639e-8■□□□□ 8.2
PRKRA-212ENST00000490501 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
PRKRA-212ENST00000490501 MRC2Q9UBG0 1479 aa11.1□□□□□ -0.63
PRKRA-212ENST00000490501 CUX1P39880 1505 aa11.09□□□□□ -0.63
PRKRA-212ENST00000490501 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
PRKRA-212ENST00000490501 DSG3P32926 999 aa11.06□□□□□ -0.64
PRKRA-212ENST00000490501 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
PRKRA-212ENST00000490501 WDR62O43379 1518 aa11.05□□□□□ -0.64
PRKRA-212ENST00000490501 WRNQ14191 1432 aaPredicted RBP eCLIP11.05□□□□□ -0.64
PRKRA-212ENST00000490501 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
PRKRA-212ENST00000490501 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
PRKRA-212ENST00000490501 CUX2O14529 1486 aa10.99□□□□□ -0.65
PRKRA-212ENST00000490501 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
PRKRA-212ENST00000490501 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
PRKRA-212ENST00000490501 POLA1P09884 1462 aaPredicted RBP10.99□□□□□ -0.65
PRKRA-212ENST00000490501 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
PRKRA-212ENST00000490501 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
PRKRA-212ENST00000490501 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
PRKRA-212ENST00000490501 SOGA1O94964 1423 aa10.93□□□□□ -0.66
PRKRA-212ENST00000490501 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
PRKRA-212ENST00000490501 CAPN15O75808 1086 aa10.91□□□□□ -0.66
PRKRA-212ENST00000490501 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
PRKRA-212ENST00000490501 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
PRKRA-212ENST00000490501 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.67
PRKRA-212ENST00000490501 AQRO60306 1485 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRKRA-212ENST00000490501 WDR97A6NE52 1622 aa10.88□□□□□ -0.67
PRKRA-212ENST00000490501 RUSC2Q8N2Y8 1516 aa10.87□□□□□ -0.67
PRKRA-212ENST00000490501 ABCA10Q8WWZ4 1543 aa10.86□□□□□ -0.67
PRKRA-212ENST00000490501 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
PRKRA-212ENST00000490501 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
PRKRA-212ENST00000490501 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
PRKRA-212ENST00000490501 ABCA5Q8WWZ7 1642 aa10.81□□□□□ -0.68
PRKRA-212ENST00000490501 GAPVD1Q14C86 1478 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms