RNA–Protein interactions for RNA: ENST00000490355.6

KCNT1-209, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-209ENST00000490355 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
KCNT1-209ENST00000490355 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
KCNT1-209ENST00000490355 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
KCNT1-209ENST00000490355 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
KCNT1-209ENST00000490355 EHMT2Q96KQ7 1210 aa24.42■■□□□ 1.5
KCNT1-209ENST00000490355 PCGF6Q9BYE7 350 aa24.24■■□□□ 1.47
KCNT1-209ENST00000490355 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
KCNT1-209ENST00000490355 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
KCNT1-209ENST00000490355 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
KCNT1-209ENST00000490355 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
KCNT1-209ENST00000490355 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
KCNT1-209ENST00000490355 HRCP23327 699 aa23.44■■□□□ 1.34
KCNT1-209ENST00000490355 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
KCNT1-209ENST00000490355 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
KCNT1-209ENST00000490355 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
KCNT1-209ENST00000490355 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
KCNT1-209ENST00000490355 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
KCNT1-209ENST00000490355 CCER1Q8TC90 406 aaPredicted RBP22.8■■□□□ 1.24
KCNT1-209ENST00000490355 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
KCNT1-209ENST00000490355 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.21
KCNT1-209ENST00000490355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
KCNT1-209ENST00000490355 DCAF1Q9Y4B6 1507 aa22.54■■□□□ 1.2
KCNT1-209ENST00000490355 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
KCNT1-209ENST00000490355 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
KCNT1-209ENST00000490355 APLP2Q06481 763 aa22.24■■□□□ 1.15
KCNT1-209ENST00000490355 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
KCNT1-209ENST00000490355 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
KCNT1-209ENST00000490355 SCRIBQ14160 1630 aa22.08■■□□□ 1.12
KCNT1-209ENST00000490355 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
KCNT1-209ENST00000490355 ABCC9O60706 1549 aa22.04■■□□□ 1.12
KCNT1-209ENST00000490355 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
KCNT1-209ENST00000490355 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
KCNT1-209ENST00000490355 ITGAEP38570 1179 aa21.97■■□□□ 1.11
KCNT1-209ENST00000490355 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
KCNT1-209ENST00000490355 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
KCNT1-209ENST00000490355 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
KCNT1-209ENST00000490355 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
KCNT1-209ENST00000490355 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
KCNT1-209ENST00000490355 NACADO15069 1562 aa21.78■■□□□ 1.08
KCNT1-209ENST00000490355 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
KCNT1-209ENST00000490355 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
KCNT1-209ENST00000490355 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
KCNT1-209ENST00000490355 BCANQ96GW7 911 aa21.52■■□□□ 1.03
KCNT1-209ENST00000490355 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
KCNT1-209ENST00000490355 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
KCNT1-209ENST00000490355 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
KCNT1-209ENST00000490355 CSRNP3Q8WYN3 585 aa21.42■■□□□ 1.02
KCNT1-209ENST00000490355 MIER1Q8N108 512 aa21.4■■□□□ 1.02
KCNT1-209ENST00000490355 WIZO95785 1651 aa21.29■■□□□ 1
KCNT1-209ENST00000490355 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
KCNT1-209ENST00000490355 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
KCNT1-209ENST00000490355 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
KCNT1-209ENST00000490355 NEFLP07196 543 aa21.18■□□□□ 0.98
KCNT1-209ENST00000490355 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
KCNT1-209ENST00000490355 POLR3GLQ9BT43 218 aa21.11■□□□□ 0.97
KCNT1-209ENST00000490355 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
KCNT1-209ENST00000490355 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
KCNT1-209ENST00000490355 SOGA1O94964 1423 aa21■□□□□ 0.95
KCNT1-209ENST00000490355 SMARCA4P51532 1647 aa21■□□□□ 0.95
KCNT1-209ENST00000490355 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
KCNT1-209ENST00000490355 DDX10Q13206 875 aaKnown RBP20.98■□□□□ 0.95
KCNT1-209ENST00000490355 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
KCNT1-209ENST00000490355 ARID3CA6NKF2 412 aa20.94■□□□□ 0.94
KCNT1-209ENST00000490355 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
KCNT1-209ENST00000490355 MYT1Q01538 1121 aa20.9■□□□□ 0.94
KCNT1-209ENST00000490355 FKBP8Q14318 412 aa20.88■□□□□ 0.93
KCNT1-209ENST00000490355 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
KCNT1-209ENST00000490355 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
KCNT1-209ENST00000490355 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
KCNT1-209ENST00000490355 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
KCNT1-209ENST00000490355 IRX6P78412 446 aaPredicted RBP20.8■□□□□ 0.92
KCNT1-209ENST00000490355 CLIP1P30622 1438 aa20.79■□□□□ 0.92
KCNT1-209ENST00000490355 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
KCNT1-209ENST00000490355 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
KCNT1-209ENST00000490355 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
KCNT1-209ENST00000490355 ANP32CO43423 234 aa20.69■□□□□ 0.9
KCNT1-209ENST00000490355 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
KCNT1-209ENST00000490355 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
KCNT1-209ENST00000490355 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
KCNT1-209ENST00000490355 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
KCNT1-209ENST00000490355 KANK4Q5T7N3 995 aaPredicted RBP20.66■□□□□ 0.9
KCNT1-209ENST00000490355 EEA1Q15075 1411 aa20.64■□□□□ 0.89
KCNT1-209ENST00000490355 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
KCNT1-209ENST00000490355 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
KCNT1-209ENST00000490355 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
KCNT1-209ENST00000490355 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.89
KCNT1-209ENST00000490355 HNRNPUQ00839 825 aaKnown RBP eCLIP20.57■□□□□ 0.88
KCNT1-209ENST00000490355 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
KCNT1-209ENST00000490355 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
KCNT1-209ENST00000490355 FAM9BQ8IZU0 186 aa20.5■□□□□ 0.87
KCNT1-209ENST00000490355 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
KCNT1-209ENST00000490355 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
KCNT1-209ENST00000490355 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.86
KCNT1-209ENST00000490355 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
KCNT1-209ENST00000490355 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
KCNT1-209ENST00000490355 TONSLQ96HA7 1378 aa20.36■□□□□ 0.85
KCNT1-209ENST00000490355 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
KCNT1-209ENST00000490355 TSHZ2Q9NRE2 1034 aa20.3■□□□□ 0.84
KCNT1-209ENST00000490355 ZNF777Q9ULD5 760 aaPredicted RBP20.3■□□□□ 0.84
KCNT1-209ENST00000490355 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms