RNA–Protein interactions for RNA: ENST00000490273.5

SLC22A23-210, Transcript of solute carrier family 22 member 23, humanhuman

TSL 1 (best) BASIC

Gene SLC22A23, Length 2,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A23-210ENST00000490273 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
SLC22A23-210ENST00000490273 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
SLC22A23-210ENST00000490273 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
SLC22A23-210ENST00000490273 ABCC9O60706 1549 aa28.32■■■□□ 2.12
SLC22A23-210ENST00000490273 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
SLC22A23-210ENST00000490273 DCAF8L2P0C7V8 631 aa27.8■■■□□ 2.04
SLC22A23-210ENST00000490273 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
SLC22A23-210ENST00000490273 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
SLC22A23-210ENST00000490273 NACADO15069 1562 aa27.41■■□□□ 1.98
SLC22A23-210ENST00000490273 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
SLC22A23-210ENST00000490273 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
SLC22A23-210ENST00000490273 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
SLC22A23-210ENST00000490273 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
SLC22A23-210ENST00000490273 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.86
SLC22A23-210ENST00000490273 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
SLC22A23-210ENST00000490273 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
SLC22A23-210ENST00000490273 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
SLC22A23-210ENST00000490273 LOC105371045A0A1W2PR82 267 aa26.16■■□□□ 1.78
SLC22A23-210ENST00000490273 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
SLC22A23-210ENST00000490273 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
SLC22A23-210ENST00000490273 WIZO95785 1651 aa25.94■■□□□ 1.74
SLC22A23-210ENST00000490273 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
SLC22A23-210ENST00000490273 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
SLC22A23-210ENST00000490273 HRCP23327 699 aa25.81■■□□□ 1.72
SLC22A23-210ENST00000490273 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
SLC22A23-210ENST00000490273 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
SLC22A23-210ENST00000490273 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
SLC22A23-210ENST00000490273 SMARCA4P51532 1647 aa25.64■■□□□ 1.7
SLC22A23-210ENST00000490273 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
SLC22A23-210ENST00000490273 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
SLC22A23-210ENST00000490273 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
SLC22A23-210ENST00000490273 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
SLC22A23-210ENST00000490273 TRIM26Q12899 539 aaPredicted RBP25.49■■□□□ 1.67
SLC22A23-210ENST00000490273 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
SLC22A23-210ENST00000490273 ATAD2BQ9ULI0 1458 aa25.41■■□□□ 1.66
SLC22A23-210ENST00000490273 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
SLC22A23-210ENST00000490273 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
SLC22A23-210ENST00000490273 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
SLC22A23-210ENST00000490273 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
SLC22A23-210ENST00000490273 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
SLC22A23-210ENST00000490273 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
SLC22A23-210ENST00000490273 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
SLC22A23-210ENST00000490273 HMGXB3Q12766 1538 aa25.2■■□□□ 1.63
SLC22A23-210ENST00000490273 SOGA1O94964 1423 aa24.98■■□□□ 1.59
SLC22A23-210ENST00000490273 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
SLC22A23-210ENST00000490273 ZEB1P37275 1124 aaPredicted RBP24.83■■□□□ 1.57
SLC22A23-210ENST00000490273 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
SLC22A23-210ENST00000490273 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
SLC22A23-210ENST00000490273 EEA1Q15075 1411 aa24.81■■□□□ 1.56
SLC22A23-210ENST00000490273 MYT1Q01538 1121 aa24.78■■□□□ 1.56
SLC22A23-210ENST00000490273 CEP162Q5TB80 1403 aa24.77■■□□□ 1.56
SLC22A23-210ENST00000490273 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
SLC22A23-210ENST00000490273 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
SLC22A23-210ENST00000490273 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
SLC22A23-210ENST00000490273 GOLGA3Q08378 1498 aa24.64■■□□□ 1.54
SLC22A23-210ENST00000490273 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
SLC22A23-210ENST00000490273 NESP48681 1621 aa24.62■■□□□ 1.53
SLC22A23-210ENST00000490273 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
SLC22A23-210ENST00000490273 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
SLC22A23-210ENST00000490273 CFTRP13569 1480 aa24.55■■□□□ 1.52
SLC22A23-210ENST00000490273 KIF21BO75037 1637 aa24.52■■□□□ 1.52
SLC22A23-210ENST00000490273 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
SLC22A23-210ENST00000490273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
SLC22A23-210ENST00000490273 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
SLC22A23-210ENST00000490273 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
SLC22A23-210ENST00000490273 CCER1Q8TC90 406 aaPredicted RBP24.41■■□□□ 1.5
SLC22A23-210ENST00000490273 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
SLC22A23-210ENST00000490273 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
SLC22A23-210ENST00000490273 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
SLC22A23-210ENST00000490273 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
SLC22A23-210ENST00000490273 CLIP1P30622 1438 aa24.35■■□□□ 1.49
SLC22A23-210ENST00000490273 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
SLC22A23-210ENST00000490273 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
SLC22A23-210ENST00000490273 CUX1P39880 1505 aa24.27■■□□□ 1.48
SLC22A23-210ENST00000490273 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
SLC22A23-210ENST00000490273 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
SLC22A23-210ENST00000490273 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
SLC22A23-210ENST00000490273 PRXQ9BXM0 1461 aa24.16■■□□□ 1.46
SLC22A23-210ENST00000490273 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.46
SLC22A23-210ENST00000490273 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.45
SLC22A23-210ENST00000490273 APLP2Q06481 763 aa24.09■■□□□ 1.45
SLC22A23-210ENST00000490273 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
SLC22A23-210ENST00000490273 KIF27Q86VH2 1401 aa24.08■■□□□ 1.45
SLC22A23-210ENST00000490273 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
SLC22A23-210ENST00000490273 HNRNPUL2Q1KMD3 747 aaKnown RBP24.05■■□□□ 1.44
SLC22A23-210ENST00000490273 WDR62O43379 1518 aa24.01■■□□□ 1.43
SLC22A23-210ENST00000490273 ARAP1Q96P48 1450 aa24■■□□□ 1.43
SLC22A23-210ENST00000490273 TOPBP1Q92547 1522 aa24■■□□□ 1.43
SLC22A23-210ENST00000490273 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
SLC22A23-210ENST00000490273 CUX2O14529 1486 aa23.9■■□□□ 1.42
SLC22A23-210ENST00000490273 IGF1RP08069 1367 aa23.86■■□□□ 1.41
SLC22A23-210ENST00000490273 KANK4Q5T7N3 995 aaPredicted RBP23.85■■□□□ 1.41
SLC22A23-210ENST00000490273 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
SLC22A23-210ENST00000490273 DIEXFQ68CQ4 756 aaKnown RBP23.84■■□□□ 1.41
SLC22A23-210ENST00000490273 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
SLC22A23-210ENST00000490273 ARHGAP35Q9NRY4 1499 aa23.82■■□□□ 1.4
SLC22A23-210ENST00000490273 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
SLC22A23-210ENST00000490273 CARMIL1Q5VZK9 1371 aa23.74■■□□□ 1.39
SLC22A23-210ENST00000490273 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
SLC22A23-210ENST00000490273 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms