RNA–Protein interactions for RNA: ENST00000490191.5

RPS18-236, Transcript of ribosomal protein S18, humanhuman

TSL 2

Gene RPS18, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-236ENST00000490191 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
RPS18-236ENST00000490191 ABCC9O60706 1549 aa37.06■■■■□ 3.52
RPS18-236ENST00000490191 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
RPS18-236ENST00000490191 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.24
RPS18-236ENST00000490191 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
RPS18-236ENST00000490191 NACADO15069 1562 aa34.76■■■■□ 3.16
RPS18-236ENST00000490191 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
RPS18-236ENST00000490191 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
RPS18-236ENST00000490191 UNC13AQ9UPW8 1703 aa34.2■■■■□ 3.07
RPS18-236ENST00000490191 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
RPS18-236ENST00000490191 BICRAQ9NZM4 1560 aa34.03■■■■□ 3.04
RPS18-236ENST00000490191 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
RPS18-236ENST00000490191 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
RPS18-236ENST00000490191 CECR2Q9BXF3 1484 aa33.49■■■□□ 2.95
RPS18-236ENST00000490191 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
RPS18-236ENST00000490191 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
RPS18-236ENST00000490191 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
RPS18-236ENST00000490191 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
RPS18-236ENST00000490191 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
RPS18-236ENST00000490191 CUX2O14529 1486 aa32.23■■■□□ 2.75
RPS18-236ENST00000490191 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
RPS18-236ENST00000490191 ERCC6Q03468 1493 aa32.08■■■□□ 2.73
RPS18-236ENST00000490191 ATAD2BQ9ULI0 1458 aa31.9■■■□□ 2.7
RPS18-236ENST00000490191 SMARCA2P51531 1590 aa31.79■■■□□ 2.68
RPS18-236ENST00000490191 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
RPS18-236ENST00000490191 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
RPS18-236ENST00000490191 NESP48681 1621 aa31.67■■■□□ 2.66
RPS18-236ENST00000490191 BAZ1BQ9UIG0 1483 aaKnown RBP31.54■■■□□ 2.64
RPS18-236ENST00000490191 BAZ1AQ9NRL2 1556 aaPredicted RBP31.51■■■□□ 2.63
RPS18-236ENST00000490191 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
RPS18-236ENST00000490191 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
RPS18-236ENST00000490191 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
RPS18-236ENST00000490191 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.61
RPS18-236ENST00000490191 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
RPS18-236ENST00000490191 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
RPS18-236ENST00000490191 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
RPS18-236ENST00000490191 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
RPS18-236ENST00000490191 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
RPS18-236ENST00000490191 WDR62O43379 1518 aa30.95■■■□□ 2.55
RPS18-236ENST00000490191 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
RPS18-236ENST00000490191 WIZO95785 1651 aa30.75■■■□□ 2.51
RPS18-236ENST00000490191 OSCARQ8IYS5 282 aa30.73■■■□□ 2.51
RPS18-236ENST00000490191 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
RPS18-236ENST00000490191 CFTRP13569 1480 aa30.62■■■□□ 2.49
RPS18-236ENST00000490191 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
RPS18-236ENST00000490191 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
RPS18-236ENST00000490191 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
RPS18-236ENST00000490191 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.44
RPS18-236ENST00000490191 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.44
RPS18-236ENST00000490191 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.44
RPS18-236ENST00000490191 IFT140Q96RY7 1462 aa30.23■■■□□ 2.43
RPS18-236ENST00000490191 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
RPS18-236ENST00000490191 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
RPS18-236ENST00000490191 ARHGEF11O15085 1522 aa30.13■■■□□ 2.41
RPS18-236ENST00000490191 ABCC8Q09428 1581 aa30.06■■■□□ 2.4
RPS18-236ENST00000490191 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
RPS18-236ENST00000490191 CCDC88BA6NC98 1476 aa30.05■■■□□ 2.4
RPS18-236ENST00000490191 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
RPS18-236ENST00000490191 EIF4G3O43432 1585 aaKnown RBP29.95■■■□□ 2.39
RPS18-236ENST00000490191 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
RPS18-236ENST00000490191 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.373e-21■■■■■ 65.8
RPS18-236ENST00000490191 TRHP20396 242 aaPredicted RBP29.84■■■□□ 2.37
RPS18-236ENST00000490191 CHD1O14646 1710 aa29.81■■■□□ 2.36
RPS18-236ENST00000490191 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
RPS18-236ENST00000490191 FBLN2P98095 1184 aa29.8■■■□□ 2.36
RPS18-236ENST00000490191 ARAP1Q96P48 1450 aa29.78■■■□□ 2.36
RPS18-236ENST00000490191 POLA1P09884 1462 aaPredicted RBP29.71■■■□□ 2.35
RPS18-236ENST00000490191 SOGA1O94964 1423 aa29.62■■■□□ 2.33
RPS18-236ENST00000490191 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
RPS18-236ENST00000490191 RAD54L2Q9Y4B4 1467 aa29.6■■■□□ 2.33
RPS18-236ENST00000490191 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
RPS18-236ENST00000490191 CHMP7Q8WUX9 453 aaPredicted RBP29.53■■■□□ 2.32
RPS18-236ENST00000490191 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
RPS18-236ENST00000490191 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
RPS18-236ENST00000490191 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
RPS18-236ENST00000490191 MAGI1Q96QZ7 1491 aaPredicted RBP29.47■■■□□ 2.31
RPS18-236ENST00000490191 FGD5Q6ZNL6 1462 aa29.44■■■□□ 2.3
RPS18-236ENST00000490191 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
RPS18-236ENST00000490191 AEBP2Q6ZN18 517 aaPredicted RBP29.39■■■□□ 2.3
RPS18-236ENST00000490191 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
RPS18-236ENST00000490191 CUX1P39880 1505 aa29.31■■■□□ 2.28
RPS18-236ENST00000490191 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
RPS18-236ENST00000490191 PBRM1Q86U86 1689 aa29.17■■■□□ 2.26
RPS18-236ENST00000490191 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
RPS18-236ENST00000490191 ABCA5Q8WWZ7 1642 aa29.07■■■□□ 2.24
RPS18-236ENST00000490191 GRIN2AQ12879 1464 aa29.01■■■□□ 2.23
RPS18-236ENST00000490191 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
RPS18-236ENST00000490191 NUP160Q12769 1436 aa28.94■■■□□ 2.22
RPS18-236ENST00000490191 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.225e-25■□□□□ 8.1
RPS18-236ENST00000490191 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
RPS18-236ENST00000490191 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
RPS18-236ENST00000490191 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
RPS18-236ENST00000490191 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
RPS18-236ENST00000490191 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
RPS18-236ENST00000490191 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
RPS18-236ENST00000490191 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
RPS18-236ENST00000490191 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
RPS18-236ENST00000490191 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
RPS18-236ENST00000490191 JPH4Q96JJ6 628 aa28.7■■■□□ 2.18
RPS18-236ENST00000490191 NPM1P06748 294 aaKnown RBP eCLIP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms