RNA–Protein interactions for RNA: ENST00000490191.5

RPS18-236, Transcript of ribosomal protein S18, humanhuman

TSL 2

Gene RPS18, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-236ENST00000490191 EFTUD2Q15029 972 aaKnown RBP eCLIP14.64□□□□□ -0.073e-19■■■■■ 79.2
RPS18-236ENST00000490191 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.373e-21■■■■■ 65.8
RPS18-236ENST00000490191 SRSF1Q07955 248 aaKnown RBP eCLIP16.4■□□□□ 0.222e-11■■■■■ 51.6
RPS18-236ENST00000490191 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.051e-7■■■■■ 45.1
RPS18-236ENST00000490191 SF3A3Q12874 501 aaKnown RBP eCLIP12.58□□□□□ -0.41e-12■■■■■ 39.1
RPS18-236ENST00000490191 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.86■□□□□ 0.294e-8■■■■■ 32.6
RPS18-236ENST00000490191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.66■□□□□ 0.583e-45■■■■■ 32.6
RPS18-236ENST00000490191 RBM22Q9NW64 420 aaKnown RBP eCLIP15.57■□□□□ 0.081e-7■■■■■ 30.3
RPS18-236ENST00000490191 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.341e-9■■■■■ 28.9
RPS18-236ENST00000490191 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.681e-12■■■■■ 28.4
RPS18-236ENST00000490191 GPKOWQ92917 476 aaPredicted RBP eCLIP18.44■□□□□ 0.546e-11■■■■□ 26.1
RPS18-236ENST00000490191 NCBP2P52298 156 aaKnown RBP eCLIP14.06□□□□□ -0.167e-29■■■■□ 23.8
RPS18-236ENST00000490191 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.9■□□□□ 0.781e-19■■■■□ 22.7
RPS18-236ENST00000490191 HNRNPMP52272 730 aaKnown RBP eCLIP26.07■■□□□ 1.763e-8■■■■□ 22.6
RPS18-236ENST00000490191 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.828e-7■■■■□ 19.7
RPS18-236ENST00000490191 PABPC4Q13310 644 aaKnown RBP eCLIP19.84■□□□□ 0.773e-71■■■■□ 19.7
RPS18-236ENST00000490191 SF3B4Q15427 424 aaKnown RBP eCLIP14.69□□□□□ -0.068e-11■■■■□ 19.4
RPS18-236ENST00000490191 SUB1P53999 127 aaKnown RBP eCLIP11.26□□□□□ -0.611e-323■■■□□ 18
RPS18-236ENST00000490191 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.618e-8■■■□□ 17.7
RPS18-236ENST00000490191 SMNDC1O75940 238 aaKnown RBP eCLIP14.43□□□□□ -0.17e-12■■■□□ 17
RPS18-236ENST00000490191 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.58□□□□□ -0.088e-6■■■□□ 14.7
RPS18-236ENST00000490191 LARP4Q71RC2 724 aaKnown RBP eCLIP14.25□□□□□ -0.131e-20■■□□□ 13.8
RPS18-236ENST00000490191 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.16□□□□□ -0.144e-12■■□□□ 13.1
RPS18-236ENST00000490191 SF3B1O75533 1304 aaKnown RBP eCLIP17.72■□□□□ 0.431e-8■■□□□ 13.1
RPS18-236ENST00000490191 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.482e-26■■□□□ 12.5
RPS18-236ENST00000490191 CPSF6Q16630 551 aaKnown RBP eCLIP14.27□□□□□ -0.139e-6■■□□□ 12.5
RPS18-236ENST00000490191 AKAP1Q92667 903 aaKnown RBP eCLIP14.32□□□□□ -0.127e-7■■□□□ 12.4
RPS18-236ENST00000490191 KHSRPQ92945 711 aaKnown RBP eCLIP18.87■□□□□ 0.614e-7■■□□□ 12.2
RPS18-236ENST00000490191 DDX3XO00571 662 aaKnown RBP eCLIP15.44■□□□□ 0.068e-13■■□□□ 12.2
RPS18-236ENST00000490191 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.34■□□□□ 0.055e-19■□□□□ 11.3
RPS18-236ENST00000490191 YBX3P16989 372 aaKnown RBP eCLIP22.64■■□□□ 1.218e-23■□□□□ 11
RPS18-236ENST00000490191 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.98□□□□□ -0.171e-323■□□□□ 10.8
RPS18-236ENST00000490191 PUM1Q14671 1186 aaKnown RBP eCLIP18.02■□□□□ 0.483e-54■□□□□ 10
RPS18-236ENST00000490191 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.59□□□□□ -0.074e-6■□□□□ 9.9
RPS18-236ENST00000490191 DDX6P26196 483 aaKnown RBP eCLIP17.27■□□□□ 0.368e-38■□□□□ 9.8
RPS18-236ENST00000490191 RPS3P23396 243 aaKnown RBP eCLIP14.94□□□□□ -0.026e-14■□□□□ 9.7
RPS18-236ENST00000490191 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.84■□□□□ 0.456e-18■□□□□ 9.1
RPS18-236ENST00000490191 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.225e-25■□□□□ 8.1
Retrieved 38 of 38 RNA–protein pairs in 13.9 ms