RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.25
CDK11A-218ENST00000489300 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
CDK11A-218ENST00000489300 ABCC9O60706 1549 aa35.92■■■■□ 3.34
CDK11A-218ENST00000489300 DCAF8L2P0C7V8 631 aa34.91■■■■□ 3.18
CDK11A-218ENST00000489300 NACADO15069 1562 aa34.7■■■■□ 3.15
CDK11A-218ENST00000489300 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
CDK11A-218ENST00000489300 RB1CC1Q8TDY2 1594 aa34.68■■■■□ 3.14
CDK11A-218ENST00000489300 MYO15BQ96JP2 1530 aa34.58■■■■□ 3.13
CDK11A-218ENST00000489300 DCAF1Q9Y4B6 1507 aa34.49■■■■□ 3.11
CDK11A-218ENST00000489300 PABPN1Q86U42 306 aaKnown RBP eCLIP33.67■■■□□ 2.98
CDK11A-218ENST00000489300 SCRIBQ14160 1630 aa33.62■■■□□ 2.97
CDK11A-218ENST00000489300 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
CDK11A-218ENST00000489300 BICRAQ9NZM4 1560 aa33.44■■■□□ 2.94
CDK11A-218ENST00000489300 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
CDK11A-218ENST00000489300 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
CDK11A-218ENST00000489300 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
CDK11A-218ENST00000489300 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
CDK11A-218ENST00000489300 CECR2Q9BXF3 1484 aa32.34■■■□□ 2.77
CDK11A-218ENST00000489300 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
CDK11A-218ENST00000489300 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
CDK11A-218ENST00000489300 SMARCA2P51531 1590 aa32.06■■■□□ 2.72
CDK11A-218ENST00000489300 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
CDK11A-218ENST00000489300 NCAPD3P42695 1498 aa32.04■■■□□ 2.72
CDK11A-218ENST00000489300 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
CDK11A-218ENST00000489300 PEG3Q9GZU2 1588 aa31.9■■■□□ 2.7
CDK11A-218ENST00000489300 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
CDK11A-218ENST00000489300 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
CDK11A-218ENST00000489300 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
CDK11A-218ENST00000489300 WIZO95785 1651 aa31.63■■■□□ 2.65
CDK11A-218ENST00000489300 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
CDK11A-218ENST00000489300 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
CDK11A-218ENST00000489300 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
CDK11A-218ENST00000489300 LAMC3Q9Y6N6 1575 aa31.12■■■□□ 2.57
CDK11A-218ENST00000489300 CCDC88BA6NC98 1476 aa31.07■■■□□ 2.56
CDK11A-218ENST00000489300 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
CDK11A-218ENST00000489300 NESP48681 1621 aa31.06■■■□□ 2.56
CDK11A-218ENST00000489300 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
CDK11A-218ENST00000489300 CFTRP13569 1480 aa30.95■■■□□ 2.55
CDK11A-218ENST00000489300 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
CDK11A-218ENST00000489300 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
CDK11A-218ENST00000489300 CUX2O14529 1486 aa30.63■■■□□ 2.49
CDK11A-218ENST00000489300 KIF21AQ7Z4S6 1674 aa30.61■■■□□ 2.49
CDK11A-218ENST00000489300 MRC2Q9UBG0 1479 aa30.6■■■□□ 2.49
CDK11A-218ENST00000489300 PRDM2Q13029 1718 aa30.51■■■□□ 2.47
CDK11A-218ENST00000489300 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
CDK11A-218ENST00000489300 WDR62O43379 1518 aa30.42■■■□□ 2.46
CDK11A-218ENST00000489300 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
CDK11A-218ENST00000489300 URB2Q14146 1524 aaKnown RBP30.33■■■□□ 2.45
CDK11A-218ENST00000489300 TOPBP1Q92547 1522 aa30.23■■■□□ 2.43
CDK11A-218ENST00000489300 DNMBPQ6XZF7 1577 aa30.21■■■□□ 2.43
CDK11A-218ENST00000489300 IFT140Q96RY7 1462 aa30.08■■■□□ 2.41
CDK11A-218ENST00000489300 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
CDK11A-218ENST00000489300 CUX1P39880 1505 aa30.02■■■□□ 2.4
CDK11A-218ENST00000489300 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
CDK11A-218ENST00000489300 SOGA1O94964 1423 aa29.98■■■□□ 2.39
CDK11A-218ENST00000489300 FGD5Q6ZNL6 1462 aa29.94■■■□□ 2.38
CDK11A-218ENST00000489300 RAD54L2Q9Y4B4 1467 aa29.85■■■□□ 2.37
CDK11A-218ENST00000489300 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
CDK11A-218ENST00000489300 ZNF608Q9ULD9 1512 aaPredicted RBP29.8■■■□□ 2.36
CDK11A-218ENST00000489300 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
CDK11A-218ENST00000489300 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
CDK11A-218ENST00000489300 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
CDK11A-218ENST00000489300 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
CDK11A-218ENST00000489300 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.351e-8■■□□□ 13.7
CDK11A-218ENST00000489300 WDR97A6NE52 1622 aa29.71■■■□□ 2.35
CDK11A-218ENST00000489300 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
CDK11A-218ENST00000489300 EIF4G3O43432 1585 aaKnown RBP29.65■■■□□ 2.34
CDK11A-218ENST00000489300 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
CDK11A-218ENST00000489300 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
CDK11A-218ENST00000489300 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
CDK11A-218ENST00000489300 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
CDK11A-218ENST00000489300 FBLN2P98095 1184 aa29.49■■■□□ 2.31
CDK11A-218ENST00000489300 DNAJC5Q9H3Z4 198 aa29.49■■■□□ 2.31
CDK11A-218ENST00000489300 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
CDK11A-218ENST00000489300 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
CDK11A-218ENST00000489300 KIF27Q86VH2 1401 aa29.46■■■□□ 2.31
CDK11A-218ENST00000489300 ABCA5Q8WWZ7 1642 aa29.45■■■□□ 2.3
CDK11A-218ENST00000489300 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
CDK11A-218ENST00000489300 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
CDK11A-218ENST00000489300 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
CDK11A-218ENST00000489300 PBRM1Q86U86 1689 aa29.32■■■□□ 2.28
CDK11A-218ENST00000489300 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
CDK11A-218ENST00000489300 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
CDK11A-218ENST00000489300 IGF1RP08069 1367 aa29.26■■■□□ 2.28
CDK11A-218ENST00000489300 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
CDK11A-218ENST00000489300 CHD1O14646 1710 aa29.16■■■□□ 2.26
CDK11A-218ENST00000489300 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
CDK11A-218ENST00000489300 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
CDK11A-218ENST00000489300 CUL7Q14999 1698 aa29.09■■■□□ 2.25
CDK11A-218ENST00000489300 EEA1Q15075 1411 aa29.08■■■□□ 2.25
CDK11A-218ENST00000489300 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
CDK11A-218ENST00000489300 CSRNP3Q8WYN3 585 aa29.02■■■□□ 2.24
CDK11A-218ENST00000489300 NUP160Q12769 1436 aa29.01■■■□□ 2.23
CDK11A-218ENST00000489300 RAPGEF2Q9Y4G8 1499 aa28.96■■■□□ 2.23
CDK11A-218ENST00000489300 CLASP1Q7Z460 1538 aa28.94■■■□□ 2.22
CDK11A-218ENST00000489300 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
CDK11A-218ENST00000489300 CEP170Q5SW79 1584 aa28.89■■■□□ 2.22
CDK11A-218ENST00000489300 JPH4Q96JJ6 628 aa28.86■■■□□ 2.21
CDK11A-218ENST00000489300 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
CDK11A-218ENST00000489300 KIAA0586Q9BVV6 1533 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms