RNA–Protein interactions for RNA: ENST00000488681.1

EMC1-211, Transcript of ER membrane protein complex subunit 1, humanhuman

TSL 3

Gene EMC1, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC1-211ENST00000488681 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
EMC1-211ENST00000488681 CCDC180Q9P1Z9 1646 aa21.99■■□□□ 1.11
EMC1-211ENST00000488681 ABCC9O60706 1549 aa21.96■■□□□ 1.11
EMC1-211ENST00000488681 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
EMC1-211ENST00000488681 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
EMC1-211ENST00000488681 NACADO15069 1562 aa20.85■□□□□ 0.93
EMC1-211ENST00000488681 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
EMC1-211ENST00000488681 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
EMC1-211ENST00000488681 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
EMC1-211ENST00000488681 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
EMC1-211ENST00000488681 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
EMC1-211ENST00000488681 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
EMC1-211ENST00000488681 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
EMC1-211ENST00000488681 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
EMC1-211ENST00000488681 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
EMC1-211ENST00000488681 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
EMC1-211ENST00000488681 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
EMC1-211ENST00000488681 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
EMC1-211ENST00000488681 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
EMC1-211ENST00000488681 ATAD2BQ9ULI0 1458 aa19.25■□□□□ 0.67
EMC1-211ENST00000488681 SMARCA4P51532 1647 aa19.2■□□□□ 0.66
EMC1-211ENST00000488681 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
EMC1-211ENST00000488681 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
EMC1-211ENST00000488681 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
EMC1-211ENST00000488681 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
EMC1-211ENST00000488681 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
EMC1-211ENST00000488681 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
EMC1-211ENST00000488681 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
EMC1-211ENST00000488681 NESP48681 1621 aa18.91■□□□□ 0.62
EMC1-211ENST00000488681 CUX2O14529 1486 aa18.82■□□□□ 0.6
EMC1-211ENST00000488681 WIZO95785 1651 aa18.8■□□□□ 0.6
EMC1-211ENST00000488681 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
EMC1-211ENST00000488681 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
EMC1-211ENST00000488681 CADPSQ9ULU8 1353 aa18.76■□□□□ 0.59
EMC1-211ENST00000488681 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
EMC1-211ENST00000488681 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
EMC1-211ENST00000488681 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
EMC1-211ENST00000488681 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
EMC1-211ENST00000488681 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
EMC1-211ENST00000488681 CFTRP13569 1480 aa18.53■□□□□ 0.56
EMC1-211ENST00000488681 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
EMC1-211ENST00000488681 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
EMC1-211ENST00000488681 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
EMC1-211ENST00000488681 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
EMC1-211ENST00000488681 WDR62O43379 1518 aa18.41■□□□□ 0.54
EMC1-211ENST00000488681 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
EMC1-211ENST00000488681 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
EMC1-211ENST00000488681 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
EMC1-211ENST00000488681 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
EMC1-211ENST00000488681 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
EMC1-211ENST00000488681 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
EMC1-211ENST00000488681 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
EMC1-211ENST00000488681 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
EMC1-211ENST00000488681 DNMBPQ6XZF7 1577 aa18.05■□□□□ 0.48
EMC1-211ENST00000488681 TRIM41Q8WV44 630 aa18■□□□□ 0.47
EMC1-211ENST00000488681 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.471e-6■■■■■ 29.6
EMC1-211ENST00000488681 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
EMC1-211ENST00000488681 SOGA1O94964 1423 aa17.97■□□□□ 0.47
EMC1-211ENST00000488681 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
EMC1-211ENST00000488681 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
EMC1-211ENST00000488681 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
EMC1-211ENST00000488681 FBLN2P98095 1184 aa17.91■□□□□ 0.46
EMC1-211ENST00000488681 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
EMC1-211ENST00000488681 CUX1P39880 1505 aa17.88■□□□□ 0.45
EMC1-211ENST00000488681 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
EMC1-211ENST00000488681 CHMP7Q8WUX9 453 aaPredicted RBP17.79■□□□□ 0.44
EMC1-211ENST00000488681 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
EMC1-211ENST00000488681 SNAPC4Q5SXM2 1469 aa17.73■□□□□ 0.43
EMC1-211ENST00000488681 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
EMC1-211ENST00000488681 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
EMC1-211ENST00000488681 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
EMC1-211ENST00000488681 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
EMC1-211ENST00000488681 ARHGEF11O15085 1522 aa17.7■□□□□ 0.42
EMC1-211ENST00000488681 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
EMC1-211ENST00000488681 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
EMC1-211ENST00000488681 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
EMC1-211ENST00000488681 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
EMC1-211ENST00000488681 CHD1O14646 1710 aa17.69■□□□□ 0.42
EMC1-211ENST00000488681 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
EMC1-211ENST00000488681 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
EMC1-211ENST00000488681 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
EMC1-211ENST00000488681 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
EMC1-211ENST00000488681 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.41
EMC1-211ENST00000488681 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
EMC1-211ENST00000488681 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
EMC1-211ENST00000488681 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
EMC1-211ENST00000488681 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
EMC1-211ENST00000488681 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
EMC1-211ENST00000488681 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
EMC1-211ENST00000488681 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
EMC1-211ENST00000488681 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
EMC1-211ENST00000488681 NUP160Q12769 1436 aa17.43■□□□□ 0.38
EMC1-211ENST00000488681 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
EMC1-211ENST00000488681 IGF1RP08069 1367 aa17.4■□□□□ 0.38
EMC1-211ENST00000488681 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
EMC1-211ENST00000488681 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
EMC1-211ENST00000488681 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
EMC1-211ENST00000488681 ERCC6L2Q5T890 1561 aa17.31■□□□□ 0.36
EMC1-211ENST00000488681 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
EMC1-211ENST00000488681 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms