RNA–Protein interactions for RNA: ENST00000487762.3

RN7SL272P-201, Transcript of RNA, 7SL, cytoplasmic 272, pseudogene, humanhuman

BASIC

Gene RN7SL272P, Length 289 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL272P-201ENST00000487762 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
RN7SL272P-201ENST00000487762 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
RN7SL272P-201ENST00000487762 ABCC9O60706 1549 aa17.79■□□□□ 0.44
RN7SL272P-201ENST00000487762 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
RN7SL272P-201ENST00000487762 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.3
RN7SL272P-201ENST00000487762 NACADO15069 1562 aa16.85■□□□□ 0.29
RN7SL272P-201ENST00000487762 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
RN7SL272P-201ENST00000487762 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
RN7SL272P-201ENST00000487762 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
RN7SL272P-201ENST00000487762 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
RN7SL272P-201ENST00000487762 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
RN7SL272P-201ENST00000487762 UNC13AQ9UPW8 1703 aa16.52■□□□□ 0.24
RN7SL272P-201ENST00000487762 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
RN7SL272P-201ENST00000487762 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
RN7SL272P-201ENST00000487762 SHROOM4Q9ULL8 1493 aa16.13■□□□□ 0.17
RN7SL272P-201ENST00000487762 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
RN7SL272P-201ENST00000487762 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
RN7SL272P-201ENST00000487762 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
RN7SL272P-201ENST00000487762 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
RN7SL272P-201ENST00000487762 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
RN7SL272P-201ENST00000487762 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
RN7SL272P-201ENST00000487762 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
RN7SL272P-201ENST00000487762 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
RN7SL272P-201ENST00000487762 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
RN7SL272P-201ENST00000487762 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
RN7SL272P-201ENST00000487762 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
RN7SL272P-201ENST00000487762 BAZ1BQ9UIG0 1483 aaKnown RBP15.41■□□□□ 0.06
RN7SL272P-201ENST00000487762 NESP48681 1621 aa15.38■□□□□ 0.05
RN7SL272P-201ENST00000487762 WIZO95785 1651 aa15.32■□□□□ 0.04
RN7SL272P-201ENST00000487762 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
RN7SL272P-201ENST00000487762 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
RN7SL272P-201ENST00000487762 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
RN7SL272P-201ENST00000487762 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
RN7SL272P-201ENST00000487762 CUX2O14529 1486 aa15.14■□□□□ 0.01
RN7SL272P-201ENST00000487762 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
RN7SL272P-201ENST00000487762 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
RN7SL272P-201ENST00000487762 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
RN7SL272P-201ENST00000487762 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
RN7SL272P-201ENST00000487762 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
RN7SL272P-201ENST00000487762 CFTRP13569 1480 aa15.02■□□□□ -0
RN7SL272P-201ENST00000487762 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
RN7SL272P-201ENST00000487762 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
RN7SL272P-201ENST00000487762 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
RN7SL272P-201ENST00000487762 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
RN7SL272P-201ENST00000487762 WDR62O43379 1518 aa14.9□□□□□ -0.02
RN7SL272P-201ENST00000487762 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
RN7SL272P-201ENST00000487762 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
RN7SL272P-201ENST00000487762 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
RN7SL272P-201ENST00000487762 PRDM2Q13029 1718 aa14.71□□□□□ -0.05
RN7SL272P-201ENST00000487762 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
RN7SL272P-201ENST00000487762 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
RN7SL272P-201ENST00000487762 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
RN7SL272P-201ENST00000487762 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
RN7SL272P-201ENST00000487762 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
RN7SL272P-201ENST00000487762 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.07
RN7SL272P-201ENST00000487762 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
RN7SL272P-201ENST00000487762 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
RN7SL272P-201ENST00000487762 CUX1P39880 1505 aa14.56□□□□□ -0.08
RN7SL272P-201ENST00000487762 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
RN7SL272P-201ENST00000487762 SOGA1O94964 1423 aa14.55□□□□□ -0.08
RN7SL272P-201ENST00000487762 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
RN7SL272P-201ENST00000487762 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
RN7SL272P-201ENST00000487762 EIF4G3O43432 1585 aaKnown RBP14.49□□□□□ -0.09
RN7SL272P-201ENST00000487762 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
RN7SL272P-201ENST00000487762 FBLN2P98095 1184 aa14.43□□□□□ -0.1
RN7SL272P-201ENST00000487762 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
RN7SL272P-201ENST00000487762 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
RN7SL272P-201ENST00000487762 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
RN7SL272P-201ENST00000487762 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
RN7SL272P-201ENST00000487762 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
RN7SL272P-201ENST00000487762 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
RN7SL272P-201ENST00000487762 GAPVD1Q14C86 1478 aa14.33□□□□□ -0.12
RN7SL272P-201ENST00000487762 CHD1O14646 1710 aa14.33□□□□□ -0.12
RN7SL272P-201ENST00000487762 WDR97A6NE52 1622 aa14.33□□□□□ -0.12
RN7SL272P-201ENST00000487762 RIMBP3CA6NJZ7 1639 aa14.31□□□□□ -0.12
RN7SL272P-201ENST00000487762 RIMBP3BA6NNM3 1639 aa14.31□□□□□ -0.12
RN7SL272P-201ENST00000487762 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
RN7SL272P-201ENST00000487762 RIMBP3Q9UFD9 1639 aa14.31□□□□□ -0.12
RN7SL272P-201ENST00000487762 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
RN7SL272P-201ENST00000487762 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
RN7SL272P-201ENST00000487762 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
RN7SL272P-201ENST00000487762 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
RN7SL272P-201ENST00000487762 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
RN7SL272P-201ENST00000487762 SYNJ2O15056 1496 aa14.26□□□□□ -0.13
RN7SL272P-201ENST00000487762 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
RN7SL272P-201ENST00000487762 PBRM1Q86U86 1689 aa14.22□□□□□ -0.13
RN7SL272P-201ENST00000487762 ARAP1Q96P48 1450 aa14.21□□□□□ -0.13
RN7SL272P-201ENST00000487762 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
RN7SL272P-201ENST00000487762 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
RN7SL272P-201ENST00000487762 IGF1RP08069 1367 aa14.15□□□□□ -0.14
RN7SL272P-201ENST00000487762 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
RN7SL272P-201ENST00000487762 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
RN7SL272P-201ENST00000487762 NUP160Q12769 1436 aa14.13□□□□□ -0.15
RN7SL272P-201ENST00000487762 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
RN7SL272P-201ENST00000487762 ERCC6L2Q5T890 1561 aa14.1□□□□□ -0.15
RN7SL272P-201ENST00000487762 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
RN7SL272P-201ENST00000487762 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
RN7SL272P-201ENST00000487762 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
RN7SL272P-201ENST00000487762 PRG4Q92954 1404 aaPredicted RBP14□□□□□ -0.17
RN7SL272P-201ENST00000487762 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms