RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 AEBP2Q6ZN18 517 aaPredicted RBP28.65■■■□□ 2.18
USP9X-208ENST00000487625 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
USP9X-208ENST00000487625 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
USP9X-208ENST00000487625 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
USP9X-208ENST00000487625 FOXD1Q16676 465 aa22.97■■□□□ 1.27
USP9X-208ENST00000487625 POTEDQ86YR6 584 aa22.78■■□□□ 1.24
USP9X-208ENST00000487625 MSH5O43196 834 aa21.76■■□□□ 1.07
USP9X-208ENST00000487625 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
USP9X-208ENST00000487625 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
USP9X-208ENST00000487625 ADRA2BP18089 450 aa20.7■□□□□ 0.9
USP9X-208ENST00000487625 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
USP9X-208ENST00000487625 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
USP9X-208ENST00000487625 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
USP9X-208ENST00000487625 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
USP9X-208ENST00000487625 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
USP9X-208ENST00000487625 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
USP9X-208ENST00000487625 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
USP9X-208ENST00000487625 HOXD11P31277 338 aaPredicted RBP18.25■□□□□ 0.51
USP9X-208ENST00000487625 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
USP9X-208ENST00000487625 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
USP9X-208ENST00000487625 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
USP9X-208ENST00000487625 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
USP9X-208ENST00000487625 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
USP9X-208ENST00000487625 POTEHQ6S545 545 aa17.65■□□□□ 0.42
USP9X-208ENST00000487625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP9X-208ENST00000487625 DSG3P32926 999 aa17.07■□□□□ 0.32
USP9X-208ENST00000487625 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
USP9X-208ENST00000487625 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
USP9X-208ENST00000487625 CAPN15O75808 1086 aa16.92■□□□□ 0.3
USP9X-208ENST00000487625 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
USP9X-208ENST00000487625 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
USP9X-208ENST00000487625 ABCB7O75027 752 aa16.5■□□□□ 0.23
USP9X-208ENST00000487625 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
USP9X-208ENST00000487625 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
USP9X-208ENST00000487625 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
USP9X-208ENST00000487625 CHRDL2Q6WN34 429 aa16.27■□□□□ 0.2
USP9X-208ENST00000487625 APLP2Q06481 763 aa16.24■□□□□ 0.19
USP9X-208ENST00000487625 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
USP9X-208ENST00000487625 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
USP9X-208ENST00000487625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
USP9X-208ENST00000487625 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
USP9X-208ENST00000487625 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
USP9X-208ENST00000487625 POLA2Q14181 598 aa15.81■□□□□ 0.12
USP9X-208ENST00000487625 PIP4P2Q8N4L2 257 aa15.73■□□□□ 0.11
USP9X-208ENST00000487625 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
USP9X-208ENST00000487625 KCNA4P22459 653 aa15.7■□□□□ 0.1
USP9X-208ENST00000487625 HAX1O00165 279 aa15.62■□□□□ 0.09
USP9X-208ENST00000487625 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
USP9X-208ENST00000487625 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
USP9X-208ENST00000487625 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.071e-7■■■□□ 15.7
USP9X-208ENST00000487625 PITPNM1O00562 1244 aa15.46■□□□□ 0.07
USP9X-208ENST00000487625 EVX2Q03828 476 aa15.46■□□□□ 0.07
USP9X-208ENST00000487625 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
USP9X-208ENST00000487625 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
USP9X-208ENST00000487625 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
USP9X-208ENST00000487625 LHX8Q68G74 356 aa15.11■□□□□ 0.01
USP9X-208ENST00000487625 C19orf67A6NJJ6 358 aa15.02■□□□□ -0
USP9X-208ENST00000487625 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
USP9X-208ENST00000487625 GABBR2O75899 941 aa15.01□□□□□ -0.01
USP9X-208ENST00000487625 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
USP9X-208ENST00000487625 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
USP9X-208ENST00000487625 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
USP9X-208ENST00000487625 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
USP9X-208ENST00000487625 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
USP9X-208ENST00000487625 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
USP9X-208ENST00000487625 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
USP9X-208ENST00000487625 POTEIP0CG38 1075 aa14.74□□□□□ -0.05
USP9X-208ENST00000487625 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
USP9X-208ENST00000487625 FBLN2P98095 1184 aa14.63□□□□□ -0.07
USP9X-208ENST00000487625 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
USP9X-208ENST00000487625 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
USP9X-208ENST00000487625 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
USP9X-208ENST00000487625 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
USP9X-208ENST00000487625 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
USP9X-208ENST00000487625 ZBTB22O15209 634 aa14.47□□□□□ -0.09
USP9X-208ENST00000487625 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
USP9X-208ENST00000487625 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
USP9X-208ENST00000487625 CLCN6P51797 869 aa14.37□□□□□ -0.11
USP9X-208ENST00000487625 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
USP9X-208ENST00000487625 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
USP9X-208ENST00000487625 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
USP9X-208ENST00000487625 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP9X-208ENST00000487625 POTEMA6NI47 508 aa14.29□□□□□ -0.12
USP9X-208ENST00000487625 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
USP9X-208ENST00000487625 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
USP9X-208ENST00000487625 POTEGQ6S5H5 508 aa14.22□□□□□ -0.13
USP9X-208ENST00000487625 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
USP9X-208ENST00000487625 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
USP9X-208ENST00000487625 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.17
USP9X-208ENST00000487625 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
USP9X-208ENST00000487625 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
USP9X-208ENST00000487625 LCE2DQ5TA82 110 aaPredicted RBP13.92□□□□□ -0.18
USP9X-208ENST00000487625 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
USP9X-208ENST00000487625 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
USP9X-208ENST00000487625 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
USP9X-208ENST00000487625 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
USP9X-208ENST00000487625 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
USP9X-208ENST00000487625 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
USP9X-208ENST00000487625 ATMINO43313 823 aaPredicted RBP13.73□□□□□ -0.21
USP9X-208ENST00000487625 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms