RNA–Protein interactions for RNA: ENST00000487601.3

RN7SL271P-201, Transcript of RNA, 7SL, cytoplasmic 271, pseudogene, humanhuman

BASIC

Gene RN7SL271P, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL271P-201ENST00000487601 AEBP2Q6ZN18 517 aaPredicted RBP11.42□□□□□ -0.58
RN7SL271P-201ENST00000487601 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
RN7SL271P-201ENST00000487601 SENP3Q9H4L4 574 aaPredicted RBP9.57□□□□□ -0.88
RN7SL271P-201ENST00000487601 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
RN7SL271P-201ENST00000487601 POTEDQ86YR6 584 aa9.36□□□□□ -0.91
RN7SL271P-201ENST00000487601 FOXD1Q16676 465 aa9.13□□□□□ -0.95
RN7SL271P-201ENST00000487601 NISCHQ9Y2I1 1504 aa8.95□□□□□ -0.98
RN7SL271P-201ENST00000487601 MSH5O43196 834 aa8.55□□□□□ -1.04
RN7SL271P-201ENST00000487601 PIAS4Q8N2W9 510 aaPredicted RBP8.27□□□□□ -1.09
RN7SL271P-201ENST00000487601 PPP6R1Q9UPN7 881 aa8.24□□□□□ -1.09
RN7SL271P-201ENST00000487601 ADRA2BP18089 450 aa8.08□□□□□ -1.12
RN7SL271P-201ENST00000487601 ABCC9O60706 1549 aa7.83□□□□□ -1.16
RN7SL271P-201ENST00000487601 PLPPR3Q6T4P5 718 aa7.81□□□□□ -1.16
RN7SL271P-201ENST00000487601 CCDC180Q9P1Z9 1646 aa7.77□□□□□ -1.17
RN7SL271P-201ENST00000487601 DNAJC5BQ9UF47 199 aa7.69□□□□□ -1.18
RN7SL271P-201ENST00000487601 MAPK8IP2Q13387 824 aaPredicted RBP7.62□□□□□ -1.19
RN7SL271P-201ENST00000487601 CACNB1Q02641 598 aaPredicted RBP7.61□□□□□ -1.19
RN7SL271P-201ENST00000487601 DMRT2Q9Y5R5 561 aa7.6□□□□□ -1.19
RN7SL271P-201ENST00000487601 DCAF1Q9Y4B6 1507 aa7.54□□□□□ -1.2
RN7SL271P-201ENST00000487601 MYO15BQ96JP2 1530 aa7.52□□□□□ -1.2
RN7SL271P-201ENST00000487601 ZCCHC6Q5VYS8 1495 aaKnown RBP7.49□□□□□ -1.21
RN7SL271P-201ENST00000487601 RNF39Q9H2S5 420 aa7.4□□□□□ -1.22
RN7SL271P-201ENST00000487601 DCAF8L2P0C7V8 631 aa7.37□□□□□ -1.23
RN7SL271P-201ENST00000487601 NACADO15069 1562 aa7.36□□□□□ -1.23
RN7SL271P-201ENST00000487601 DNAJC5Q9H3Z4 198 aa7.33□□□□□ -1.24
RN7SL271P-201ENST00000487601 RB1CC1Q8TDY2 1594 aa7.31□□□□□ -1.24
RN7SL271P-201ENST00000487601 PABPN1Q86U42 306 aaKnown RBP eCLIP7.22□□□□□ -1.25
RN7SL271P-201ENST00000487601 UNC13AQ9UPW8 1703 aa7.21□□□□□ -1.25
RN7SL271P-201ENST00000487601 POTEHQ6S545 545 aa7.17□□□□□ -1.26
RN7SL271P-201ENST00000487601 HOXD11P31277 338 aaPredicted RBP7.15□□□□□ -1.26
RN7SL271P-201ENST00000487601 C1QBPQ07021 282 aaKnown RBP7.15□□□□□ -1.26
RN7SL271P-201ENST00000487601 BICRAQ9NZM4 1560 aa7.14□□□□□ -1.27
RN7SL271P-201ENST00000487601 SHROOM4Q9ULL8 1493 aa7.14□□□□□ -1.27
RN7SL271P-201ENST00000487601 SCAF1Q9H7N4 1312 aaKnown RBP7.12□□□□□ -1.27
RN7SL271P-201ENST00000487601 CECR2Q9BXF3 1484 aa7.11□□□□□ -1.27
RN7SL271P-201ENST00000487601 CC2D2AQ9P2K1 1620 aa7.09□□□□□ -1.27
RN7SL271P-201ENST00000487601 DCAF8L1A6NGE4 600 aa7.08□□□□□ -1.28
RN7SL271P-201ENST00000487601 EIF4G1Q04637 1599 aaKnown RBP6.98□□□□□ -1.29
RN7SL271P-201ENST00000487601 SCRIBQ14160 1630 aa6.98□□□□□ -1.29
RN7SL271P-201ENST00000487601 BAZ1AQ9NRL2 1556 aaPredicted RBP6.95□□□□□ -1.3
RN7SL271P-201ENST00000487601 RSF1Q96T23 1441 aaPredicted RBP6.94□□□□□ -1.3
RN7SL271P-201ENST00000487601 SUPT5HO00267 1087 aaKnown RBP6.94□□□□□ -1.3
RN7SL271P-201ENST00000487601 CUX2O14529 1486 aa6.92□□□□□ -1.3
RN7SL271P-201ENST00000487601 RNF216Q9NWF9 866 aaPredicted RBP6.89□□□□□ -1.31
RN7SL271P-201ENST00000487601 PPP4R3CPQ6ZMV5 832 aa6.84□□□□□ -1.31
RN7SL271P-201ENST00000487601 SMARCA2P51531 1590 aa6.83□□□□□ -1.32
RN7SL271P-201ENST00000487601 PEG3Q9GZU2 1588 aa6.83□□□□□ -1.32
RN7SL271P-201ENST00000487601 TRIM41Q8WV44 630 aa6.83□□□□□ -1.32
RN7SL271P-201ENST00000487601 NCAPD3P42695 1498 aa6.83□□□□□ -1.32
RN7SL271P-201ENST00000487601 MROH2BQ7Z745 1585 aa6.81□□□□□ -1.32
RN7SL271P-201ENST00000487601 ERCC6Q03468 1493 aa6.79□□□□□ -1.32
RN7SL271P-201ENST00000487601 SMARCA4P51532 1647 aa6.79□□□□□ -1.32
RN7SL271P-201ENST00000487601 ATAD2BQ9ULI0 1458 aa6.79□□□□□ -1.32
RN7SL271P-201ENST00000487601 CNKSR2Q8WXI2 1034 aa6.78□□□□□ -1.32
RN7SL271P-201ENST00000487601 DSG3P32926 999 aa6.75□□□□□ -1.33
RN7SL271P-201ENST00000487601 TOP2AP11388 1531 aaKnown RBP6.75□□□□□ -1.33
RN7SL271P-201ENST00000487601 HMGXB3Q12766 1538 aa6.74□□□□□ -1.33
RN7SL271P-201ENST00000487601 BAZ1BQ9UIG0 1483 aaKnown RBP6.73□□□□□ -1.33
RN7SL271P-201ENST00000487601 CCDC88BA6NC98 1476 aa6.68□□□□□ -1.34
RN7SL271P-201ENST00000487601 THOC2Q8NI27 1593 aaKnown RBP6.68□□□□□ -1.34
RN7SL271P-201ENST00000487601 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
RN7SL271P-201ENST00000487601 WIZO95785 1651 aa6.66□□□□□ -1.34
RN7SL271P-201ENST00000487601 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.35
RN7SL271P-201ENST00000487601 NESP48681 1621 aa6.65□□□□□ -1.35
RN7SL271P-201ENST00000487601 CFTRP13569 1480 aa6.63□□□□□ -1.35
RN7SL271P-201ENST00000487601 U3KPZ7 1027 aaPredicted RBP6.62□□□□□ -1.35
RN7SL271P-201ENST00000487601 EEA1Q15075 1411 aa6.61□□□□□ -1.35
RN7SL271P-201ENST00000487601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.6□□□□□ -1.35
RN7SL271P-201ENST00000487601 ABCC8Q09428 1581 aa6.59□□□□□ -1.35
RN7SL271P-201ENST00000487601 PDS5BQ9NTI5 1447 aa6.59□□□□□ -1.36
RN7SL271P-201ENST00000487601 KIF21AQ7Z4S6 1674 aa6.58□□□□□ -1.36
RN7SL271P-201ENST00000487601 WRNQ14191 1432 aaPredicted RBP eCLIP6.56□□□□□ -1.36
RN7SL271P-201ENST00000487601 LAMC3Q9Y6N6 1575 aa6.54□□□□□ -1.36
RN7SL271P-201ENST00000487601 RIMBP3CA6NJZ7 1639 aa6.52□□□□□ -1.37
RN7SL271P-201ENST00000487601 RIMBP3BA6NNM3 1639 aa6.52□□□□□ -1.37
RN7SL271P-201ENST00000487601 RIMBP3Q9UFD9 1639 aa6.52□□□□□ -1.37
RN7SL271P-201ENST00000487601 CSRNP3Q8WYN3 585 aa6.52□□□□□ -1.37
RN7SL271P-201ENST00000487601 OSCARQ8IYS5 282 aa6.51□□□□□ -1.37
RN7SL271P-201ENST00000487601 WDR62O43379 1518 aa6.49□□□□□ -1.37
RN7SL271P-201ENST00000487601 CAPN15O75808 1086 aa6.48□□□□□ -1.37
RN7SL271P-201ENST00000487601 SP7Q8TDD2 431 aaPredicted RBP6.47□□□□□ -1.37
RN7SL271P-201ENST00000487601 FANCD2Q9BXW9 1451 aa6.47□□□□□ -1.37
RN7SL271P-201ENST00000487601 MRC2Q9UBG0 1479 aa6.47□□□□□ -1.37
RN7SL271P-201ENST00000487601 KIF27Q86VH2 1401 aa6.46□□□□□ -1.38
RN7SL271P-201ENST00000487601 ARHGEF11O15085 1522 aa6.45□□□□□ -1.38
RN7SL271P-201ENST00000487601 CEP164Q9UPV0 1460 aa6.44□□□□□ -1.38
RN7SL271P-201ENST00000487601 TOP2BQ02880 1626 aa6.43□□□□□ -1.38
RN7SL271P-201ENST00000487601 CHRDL2Q6WN34 429 aa6.43□□□□□ -1.38
RN7SL271P-201ENST00000487601 TRHP20396 242 aaPredicted RBP6.42□□□□□ -1.38
RN7SL271P-201ENST00000487601 TNIKQ9UKE5 1360 aa6.42□□□□□ -1.38
RN7SL271P-201ENST00000487601 FAM9AQ8IZU1 332 aaPredicted RBP6.41□□□□□ -1.38
RN7SL271P-201ENST00000487601 SOGA1O94964 1423 aa6.4□□□□□ -1.39
RN7SL271P-201ENST00000487601 NPM3O75607 178 aaKnown RBP6.39□□□□□ -1.39
RN7SL271P-201ENST00000487601 IGF1RP08069 1367 aa6.39□□□□□ -1.39
RN7SL271P-201ENST00000487601 ABCB7O75027 752 aa6.38□□□□□ -1.39
RN7SL271P-201ENST00000487601 CYB5RLQ6IPT4 315 aa6.38□□□□□ -1.39
RN7SL271P-201ENST00000487601 ABCA10Q8WWZ4 1543 aa6.38□□□□□ -1.39
RN7SL271P-201ENST00000487601 DNMBPQ6XZF7 1577 aa6.38□□□□□ -1.39
RN7SL271P-201ENST00000487601 BIVM-ERCC5R4GMW8 1640 aa6.38□□□□□ -1.39
RN7SL271P-201ENST00000487601 CUX1P39880 1505 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms