RNA–Protein interactions for RNA: ENST00000487279.6

IFFO1-209, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 2,786 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-209ENST00000487279 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
IFFO1-209ENST00000487279 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
IFFO1-209ENST00000487279 HRCP23327 699 aa27.89■■■□□ 2.06
IFFO1-209ENST00000487279 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
IFFO1-209ENST00000487279 PPARGC1BQ86YN6 1023 aaKnown RBP27.53■■■□□ 2
IFFO1-209ENST00000487279 PCGF6Q9BYE7 350 aa27.5■■□□□ 1.99
IFFO1-209ENST00000487279 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
IFFO1-209ENST00000487279 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
IFFO1-209ENST00000487279 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
IFFO1-209ENST00000487279 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
IFFO1-209ENST00000487279 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
IFFO1-209ENST00000487279 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
IFFO1-209ENST00000487279 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.86
IFFO1-209ENST00000487279 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
IFFO1-209ENST00000487279 TRIM26Q12899 539 aaPredicted RBP26.46■■□□□ 1.83
IFFO1-209ENST00000487279 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
IFFO1-209ENST00000487279 ZEB1P37275 1124 aaPredicted RBP26.12■■□□□ 1.77
IFFO1-209ENST00000487279 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
IFFO1-209ENST00000487279 ABCC9O60706 1549 aa25.9■■□□□ 1.74
IFFO1-209ENST00000487279 NEUROD1Q13562 356 aa25.76■■□□□ 1.71
IFFO1-209ENST00000487279 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
IFFO1-209ENST00000487279 ACIN1Q9UKV3 1341 aaKnown RBP25.74■■□□□ 1.71
IFFO1-209ENST00000487279 FAM9AQ8IZU1 332 aaPredicted RBP25.73■■□□□ 1.71
IFFO1-209ENST00000487279 GTF3C3Q9Y5Q9 886 aa25.61■■□□□ 1.69
IFFO1-209ENST00000487279 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
IFFO1-209ENST00000487279 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
IFFO1-209ENST00000487279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
IFFO1-209ENST00000487279 MYT1Q01538 1121 aa25.5■■□□□ 1.67
IFFO1-209ENST00000487279 NACADO15069 1562 aa25.44■■□□□ 1.66
IFFO1-209ENST00000487279 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
IFFO1-209ENST00000487279 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
IFFO1-209ENST00000487279 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
IFFO1-209ENST00000487279 CENPBP07199 599 aaPredicted RBP25.38■■□□□ 1.65
IFFO1-209ENST00000487279 DIEXFQ68CQ4 756 aaKnown RBP25.38■■□□□ 1.65
IFFO1-209ENST00000487279 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
IFFO1-209ENST00000487279 WIZO95785 1651 aa25.17■■□□□ 1.62
IFFO1-209ENST00000487279 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
IFFO1-209ENST00000487279 TTBK1Q5TCY1 1321 aaPredicted RBP25.11■■□□□ 1.61
IFFO1-209ENST00000487279 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
IFFO1-209ENST00000487279 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
IFFO1-209ENST00000487279 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
IFFO1-209ENST00000487279 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
IFFO1-209ENST00000487279 MIER1Q8N108 512 aa24.77■■□□□ 1.56
IFFO1-209ENST00000487279 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
IFFO1-209ENST00000487279 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
IFFO1-209ENST00000487279 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
IFFO1-209ENST00000487279 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
IFFO1-209ENST00000487279 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
IFFO1-209ENST00000487279 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
IFFO1-209ENST00000487279 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
IFFO1-209ENST00000487279 CEP162Q5TB80 1403 aa24.44■■□□□ 1.5
IFFO1-209ENST00000487279 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
IFFO1-209ENST00000487279 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
IFFO1-209ENST00000487279 SUPT16HQ9Y5B9 1047 aaKnown RBP24.34■■□□□ 1.49
IFFO1-209ENST00000487279 SOGA1O94964 1423 aa24.31■■□□□ 1.48
IFFO1-209ENST00000487279 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
IFFO1-209ENST00000487279 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
IFFO1-209ENST00000487279 TSHZ2Q9NRE2 1034 aa24.22■■□□□ 1.47
IFFO1-209ENST00000487279 TNIKQ9UKE5 1360 aa24.2■■□□□ 1.47
IFFO1-209ENST00000487279 ANP32EQ9BTT0 268 aa24.2■■□□□ 1.46
IFFO1-209ENST00000487279 BCL11AQ9H165 835 aa24.17■■□□□ 1.46
IFFO1-209ENST00000487279 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
IFFO1-209ENST00000487279 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
IFFO1-209ENST00000487279 PEG3Q9GZU2 1588 aa24.1■■□□□ 1.45
IFFO1-209ENST00000487279 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
IFFO1-209ENST00000487279 CLSPNQ9HAW4 1339 aa24.02■■□□□ 1.44
IFFO1-209ENST00000487279 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
IFFO1-209ENST00000487279 BCANQ96GW7 911 aa23.99■■□□□ 1.43
IFFO1-209ENST00000487279 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
IFFO1-209ENST00000487279 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
IFFO1-209ENST00000487279 KCNH8Q96L42 1107 aa23.9■■□□□ 1.42
IFFO1-209ENST00000487279 APLP2Q06481 763 aa23.86■■□□□ 1.41
IFFO1-209ENST00000487279 EEA1Q15075 1411 aa23.84■■□□□ 1.41
IFFO1-209ENST00000487279 CLIP1P30622 1438 aa23.79■■□□□ 1.4
IFFO1-209ENST00000487279 DHX57Q6P158 1386 aaKnown RBP23.77■■□□□ 1.4
IFFO1-209ENST00000487279 FKBP8Q14318 412 aa23.77■■□□□ 1.4
IFFO1-209ENST00000487279 VPS8Q8N3P4 1428 aa23.71■■□□□ 1.39
IFFO1-209ENST00000487279 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
IFFO1-209ENST00000487279 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
IFFO1-209ENST00000487279 RBM19Q9Y4C8 960 aaKnown RBP23.67■■□□□ 1.38
IFFO1-209ENST00000487279 KIF21BO75037 1637 aa23.63■■□□□ 1.37
IFFO1-209ENST00000487279 ITGAEP38570 1179 aa23.63■■□□□ 1.37
IFFO1-209ENST00000487279 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
IFFO1-209ENST00000487279 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
IFFO1-209ENST00000487279 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
IFFO1-209ENST00000487279 CUX1P39880 1505 aa23.51■■□□□ 1.35
IFFO1-209ENST00000487279 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
IFFO1-209ENST00000487279 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
IFFO1-209ENST00000487279 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
IFFO1-209ENST00000487279 MSH5O43196 834 aa23.48■■□□□ 1.35
IFFO1-209ENST00000487279 NEFLP07196 543 aa23.48■■□□□ 1.35
IFFO1-209ENST00000487279 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
IFFO1-209ENST00000487279 CFTRP13569 1480 aa23.39■■□□□ 1.33
IFFO1-209ENST00000487279 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
IFFO1-209ENST00000487279 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
IFFO1-209ENST00000487279 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
IFFO1-209ENST00000487279 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
IFFO1-209ENST00000487279 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
IFFO1-209ENST00000487279 IRX6P78412 446 aaPredicted RBP23.25■■□□□ 1.31
IFFO1-209ENST00000487279 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms