RNA–Protein interactions for RNA: ENST00000486950.5

NIN-214, Transcript of ninein, humanhuman

TSL 3

Gene NIN, Length 605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-214ENST00000486950 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
NIN-214ENST00000486950 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
NIN-214ENST00000486950 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
NIN-214ENST00000486950 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
NIN-214ENST00000486950 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
NIN-214ENST00000486950 FOXD1Q16676 465 aa14.66□□□□□ -0.06
NIN-214ENST00000486950 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
NIN-214ENST00000486950 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
NIN-214ENST00000486950 ADRA2BP18089 450 aa14.3□□□□□ -0.12
NIN-214ENST00000486950 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
NIN-214ENST00000486950 ABCC9O60706 1549 aa13.49□□□□□ -0.25
NIN-214ENST00000486950 MSH5O43196 834 aa13.31□□□□□ -0.28
NIN-214ENST00000486950 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
NIN-214ENST00000486950 CCDC180Q9P1Z9 1646 aa13.23□□□□□ -0.29
NIN-214ENST00000486950 KCNA4P22459 653 aa13.21□□□□□ -0.29
NIN-214ENST00000486950 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
NIN-214ENST00000486950 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
NIN-214ENST00000486950 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
NIN-214ENST00000486950 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
NIN-214ENST00000486950 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
NIN-214ENST00000486950 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
NIN-214ENST00000486950 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
NIN-214ENST00000486950 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
NIN-214ENST00000486950 NACADO15069 1562 aa12.6□□□□□ -0.39
NIN-214ENST00000486950 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
NIN-214ENST00000486950 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
NIN-214ENST00000486950 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
NIN-214ENST00000486950 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
NIN-214ENST00000486950 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
NIN-214ENST00000486950 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
NIN-214ENST00000486950 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
NIN-214ENST00000486950 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
NIN-214ENST00000486950 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
NIN-214ENST00000486950 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
NIN-214ENST00000486950 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
NIN-214ENST00000486950 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
NIN-214ENST00000486950 ZBTB22O15209 634 aa12.21□□□□□ -0.45
NIN-214ENST00000486950 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
NIN-214ENST00000486950 CC2D2AQ9P2K1 1620 aa12.17□□□□□ -0.46
NIN-214ENST00000486950 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
NIN-214ENST00000486950 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
NIN-214ENST00000486950 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
NIN-214ENST00000486950 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
NIN-214ENST00000486950 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
NIN-214ENST00000486950 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
NIN-214ENST00000486950 ZCCHC6Q5VYS8 1495 aaKnown RBP11.94□□□□□ -0.5
NIN-214ENST00000486950 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
NIN-214ENST00000486950 CUX2O14529 1486 aa11.85□□□□□ -0.51
NIN-214ENST00000486950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.526e-6■□□□□ 11
NIN-214ENST00000486950 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
NIN-214ENST00000486950 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
NIN-214ENST00000486950 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
NIN-214ENST00000486950 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
NIN-214ENST00000486950 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
NIN-214ENST00000486950 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
NIN-214ENST00000486950 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
NIN-214ENST00000486950 ATXN8OSP0DMR3 200 aa11.51□□□□□ -0.57
NIN-214ENST00000486950 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
NIN-214ENST00000486950 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
NIN-214ENST00000486950 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
NIN-214ENST00000486950 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
NIN-214ENST00000486950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
NIN-214ENST00000486950 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
NIN-214ENST00000486950 NESP48681 1621 aa11.44□□□□□ -0.58
NIN-214ENST00000486950 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
NIN-214ENST00000486950 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
NIN-214ENST00000486950 LAMC3Q9Y6N6 1575 aa11.43□□□□□ -0.58
NIN-214ENST00000486950 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
NIN-214ENST00000486950 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
NIN-214ENST00000486950 SPINK5Q9NQ38 1064 aaPredicted RBP11.37□□□□□ -0.59
NIN-214ENST00000486950 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
NIN-214ENST00000486950 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
NIN-214ENST00000486950 OSCARQ8IYS5 282 aa11.32□□□□□ -0.6
NIN-214ENST00000486950 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
NIN-214ENST00000486950 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
NIN-214ENST00000486950 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
NIN-214ENST00000486950 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
NIN-214ENST00000486950 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
NIN-214ENST00000486950 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
NIN-214ENST00000486950 CAPN15O75808 1086 aa11.24□□□□□ -0.61
NIN-214ENST00000486950 APLP2Q06481 763 aa11.24□□□□□ -0.61
NIN-214ENST00000486950 WDR62O43379 1518 aa11.22□□□□□ -0.61
NIN-214ENST00000486950 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
NIN-214ENST00000486950 MROH2BQ7Z745 1585 aa11.12□□□□□ -0.63
NIN-214ENST00000486950 ABCB7O75027 752 aa11.12□□□□□ -0.63
NIN-214ENST00000486950 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
NIN-214ENST00000486950 POLA2Q14181 598 aa11.1□□□□□ -0.63
NIN-214ENST00000486950 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
NIN-214ENST00000486950 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
NIN-214ENST00000486950 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
NIN-214ENST00000486950 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
NIN-214ENST00000486950 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
NIN-214ENST00000486950 DSG3P32926 999 aa11.03□□□□□ -0.64
NIN-214ENST00000486950 CFTRP13569 1480 aa11.02□□□□□ -0.65
NIN-214ENST00000486950 FKBP8Q14318 412 aa11.02□□□□□ -0.65
NIN-214ENST00000486950 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
NIN-214ENST00000486950 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
NIN-214ENST00000486950 WIZO95785 1651 aa11□□□□□ -0.65
NIN-214ENST00000486950 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
NIN-214ENST00000486950 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms