RNA–Protein interactions for RNA: ENST00000486606.5

COX17-204, Transcript of cytochrome c oxidase copper chaperone COX17, humanhuman

TSL 3

Gene COX17, Length 430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX17-204ENST00000486606 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
COX17-204ENST00000486606 CHIC1Q5VXU3 224 aa24.6■■□□□ 1.53
COX17-204ENST00000486606 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
COX17-204ENST00000486606 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
COX17-204ENST00000486606 FOXD1Q16676 465 aa20.83■□□□□ 0.93
COX17-204ENST00000486606 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
COX17-204ENST00000486606 MSH5O43196 834 aa19.49■□□□□ 0.71
COX17-204ENST00000486606 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
COX17-204ENST00000486606 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
COX17-204ENST00000486606 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
COX17-204ENST00000486606 ADRA2BP18089 450 aa19.27■□□□□ 0.68
COX17-204ENST00000486606 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
COX17-204ENST00000486606 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
COX17-204ENST00000486606 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
COX17-204ENST00000486606 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
COX17-204ENST00000486606 NISCHQ9Y2I1 1504 aa17.1■□□□□ 0.33
COX17-204ENST00000486606 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
COX17-204ENST00000486606 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
COX17-204ENST00000486606 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
COX17-204ENST00000486606 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
COX17-204ENST00000486606 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
COX17-204ENST00000486606 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
COX17-204ENST00000486606 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
COX17-204ENST00000486606 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
COX17-204ENST00000486606 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
COX17-204ENST00000486606 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
COX17-204ENST00000486606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
COX17-204ENST00000486606 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
COX17-204ENST00000486606 KCNA4P22459 653 aa15.73■□□□□ 0.11
COX17-204ENST00000486606 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
COX17-204ENST00000486606 CAPN15O75808 1086 aa15.57■□□□□ 0.08
COX17-204ENST00000486606 DSG3P32926 999 aa15.55■□□□□ 0.08
COX17-204ENST00000486606 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
COX17-204ENST00000486606 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
COX17-204ENST00000486606 ABCB7O75027 752 aa15.24■□□□□ 0.03
COX17-204ENST00000486606 APLP2Q06481 763 aa15.2■□□□□ 0.02
COX17-204ENST00000486606 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
COX17-204ENST00000486606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
COX17-204ENST00000486606 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
COX17-204ENST00000486606 POTEHQ6S545 545 aa15.16■□□□□ 0.02
COX17-204ENST00000486606 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
COX17-204ENST00000486606 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
COX17-204ENST00000486606 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
COX17-204ENST00000486606 POLA2Q14181 598 aa14.83□□□□□ -0.04
COX17-204ENST00000486606 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
COX17-204ENST00000486606 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
COX17-204ENST00000486606 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
COX17-204ENST00000486606 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
COX17-204ENST00000486606 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
COX17-204ENST00000486606 ABCC9O60706 1549 aa14.52□□□□□ -0.08
COX17-204ENST00000486606 ZBTB22O15209 634 aa14.49□□□□□ -0.09
COX17-204ENST00000486606 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
COX17-204ENST00000486606 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
COX17-204ENST00000486606 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
COX17-204ENST00000486606 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
COX17-204ENST00000486606 ZCCHC6Q5VYS8 1495 aaKnown RBP14.3□□□□□ -0.12
COX17-204ENST00000486606 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
COX17-204ENST00000486606 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
COX17-204ENST00000486606 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
COX17-204ENST00000486606 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
COX17-204ENST00000486606 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
COX17-204ENST00000486606 NACADO15069 1562 aa14.16□□□□□ -0.14
COX17-204ENST00000486606 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
COX17-204ENST00000486606 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
COX17-204ENST00000486606 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
COX17-204ENST00000486606 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
COX17-204ENST00000486606 FBLN2P98095 1184 aa14.02□□□□□ -0.17
COX17-204ENST00000486606 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
COX17-204ENST00000486606 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
COX17-204ENST00000486606 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
COX17-204ENST00000486606 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
COX17-204ENST00000486606 HAX1O00165 279 aa13.97□□□□□ -0.17
COX17-204ENST00000486606 EVX2Q03828 476 aa13.86□□□□□ -0.19
COX17-204ENST00000486606 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
COX17-204ENST00000486606 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
COX17-204ENST00000486606 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
COX17-204ENST00000486606 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
COX17-204ENST00000486606 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
COX17-204ENST00000486606 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
COX17-204ENST00000486606 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
COX17-204ENST00000486606 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
COX17-204ENST00000486606 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
COX17-204ENST00000486606 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
COX17-204ENST00000486606 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
COX17-204ENST00000486606 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
COX17-204ENST00000486606 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
COX17-204ENST00000486606 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
COX17-204ENST00000486606 GABBR2O75899 941 aa13.49□□□□□ -0.25
COX17-204ENST00000486606 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
COX17-204ENST00000486606 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
COX17-204ENST00000486606 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
COX17-204ENST00000486606 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
COX17-204ENST00000486606 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
COX17-204ENST00000486606 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
COX17-204ENST00000486606 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
COX17-204ENST00000486606 LHX8Q68G74 356 aa13.24□□□□□ -0.29
COX17-204ENST00000486606 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
COX17-204ENST00000486606 SMARCA4P51532 1647 aa13.21□□□□□ -0.29
COX17-204ENST00000486606 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
COX17-204ENST00000486606 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms