RNA–Protein interactions for RNA: ENST00000485559.1

TRMU-214, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 2

Gene TRMU, Length 2,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-214ENST00000485559 NISCHQ9Y2I1 1504 aa30.37■■■□□ 2.45
TRMU-214ENST00000485559 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
TRMU-214ENST00000485559 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
TRMU-214ENST00000485559 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.65
TRMU-214ENST00000485559 ABCC9O60706 1549 aa25.14■■□□□ 1.61
TRMU-214ENST00000485559 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
TRMU-214ENST00000485559 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
TRMU-214ENST00000485559 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
TRMU-214ENST00000485559 NACADO15069 1562 aa24.57■■□□□ 1.52
TRMU-214ENST00000485559 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
TRMU-214ENST00000485559 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.49
TRMU-214ENST00000485559 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.46
TRMU-214ENST00000485559 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
TRMU-214ENST00000485559 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRMU-214ENST00000485559 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
TRMU-214ENST00000485559 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
TRMU-214ENST00000485559 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
TRMU-214ENST00000485559 HRCP23327 699 aa23.58■■□□□ 1.37
TRMU-214ENST00000485559 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
TRMU-214ENST00000485559 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
TRMU-214ENST00000485559 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
TRMU-214ENST00000485559 PCGF6Q9BYE7 350 aa23.35■■□□□ 1.33
TRMU-214ENST00000485559 WIZO95785 1651 aa23.34■■□□□ 1.33
TRMU-214ENST00000485559 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
TRMU-214ENST00000485559 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
TRMU-214ENST00000485559 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
TRMU-214ENST00000485559 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
TRMU-214ENST00000485559 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
TRMU-214ENST00000485559 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
TRMU-214ENST00000485559 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
TRMU-214ENST00000485559 SMARCA2P51531 1590 aa22.89■■□□□ 1.26
TRMU-214ENST00000485559 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
TRMU-214ENST00000485559 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
TRMU-214ENST00000485559 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
TRMU-214ENST00000485559 TRIM26Q12899 539 aaPredicted RBP22.71■■□□□ 1.23
TRMU-214ENST00000485559 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
TRMU-214ENST00000485559 HMGXB3Q12766 1538 aa22.64■■□□□ 1.22
TRMU-214ENST00000485559 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
TRMU-214ENST00000485559 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
TRMU-214ENST00000485559 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
TRMU-214ENST00000485559 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
TRMU-214ENST00000485559 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
TRMU-214ENST00000485559 CFTRP13569 1480 aa22.24■■□□□ 1.15
TRMU-214ENST00000485559 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
TRMU-214ENST00000485559 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
TRMU-214ENST00000485559 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
TRMU-214ENST00000485559 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
TRMU-214ENST00000485559 NESP48681 1621 aa22.08■■□□□ 1.12
TRMU-214ENST00000485559 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
TRMU-214ENST00000485559 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
TRMU-214ENST00000485559 SOGA1O94964 1423 aa22.04■■□□□ 1.12
TRMU-214ENST00000485559 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
TRMU-214ENST00000485559 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
TRMU-214ENST00000485559 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
TRMU-214ENST00000485559 CUX1P39880 1505 aa21.97■■□□□ 1.11
TRMU-214ENST00000485559 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
TRMU-214ENST00000485559 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
TRMU-214ENST00000485559 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
TRMU-214ENST00000485559 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
TRMU-214ENST00000485559 EEA1Q15075 1411 aa21.83■■□□□ 1.09
TRMU-214ENST00000485559 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
TRMU-214ENST00000485559 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
TRMU-214ENST00000485559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
TRMU-214ENST00000485559 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
TRMU-214ENST00000485559 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
TRMU-214ENST00000485559 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
TRMU-214ENST00000485559 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
TRMU-214ENST00000485559 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
TRMU-214ENST00000485559 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
TRMU-214ENST00000485559 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
TRMU-214ENST00000485559 ACIN1Q9UKV3 1341 aaKnown RBP21.67■■□□□ 1.06
TRMU-214ENST00000485559 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
TRMU-214ENST00000485559 CUX2O14529 1486 aa21.63■■□□□ 1.05
TRMU-214ENST00000485559 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
TRMU-214ENST00000485559 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
TRMU-214ENST00000485559 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
TRMU-214ENST00000485559 GOLGA3Q08378 1498 aa21.61■■□□□ 1.05
TRMU-214ENST00000485559 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
TRMU-214ENST00000485559 KIF21BO75037 1637 aa21.56■■□□□ 1.04
TRMU-214ENST00000485559 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
TRMU-214ENST00000485559 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
TRMU-214ENST00000485559 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.04
TRMU-214ENST00000485559 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
TRMU-214ENST00000485559 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
TRMU-214ENST00000485559 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
TRMU-214ENST00000485559 IGF1RP08069 1367 aa21.49■■□□□ 1.03
TRMU-214ENST00000485559 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
TRMU-214ENST00000485559 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
TRMU-214ENST00000485559 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
TRMU-214ENST00000485559 CENPBP07199 599 aaPredicted RBP21.46■■□□□ 1.03
TRMU-214ENST00000485559 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
TRMU-214ENST00000485559 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
TRMU-214ENST00000485559 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
TRMU-214ENST00000485559 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.01
TRMU-214ENST00000485559 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
TRMU-214ENST00000485559 WDR62O43379 1518 aa21.36■■□□□ 1.01
TRMU-214ENST00000485559 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
TRMU-214ENST00000485559 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
TRMU-214ENST00000485559 CLIP1P30622 1438 aa21.31■■□□□ 1
TRMU-214ENST00000485559 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms