RNA–Protein interactions for RNA: ENST00000484717.5

VILL-208, Transcript of villin like, humanhuman

TSL 1 (best)

Gene VILL, Length 2,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VILL-208ENST00000484717 NISCHQ9Y2I1 1504 aa41.12■■■■■ 4.17
VILL-208ENST00000484717 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
VILL-208ENST00000484717 ZCCHC6Q5VYS8 1495 aaKnown RBP34.56■■■■□ 3.12
VILL-208ENST00000484717 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
VILL-208ENST00000484717 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
VILL-208ENST00000484717 ABCC9O60706 1549 aa33.93■■■■□ 3.02
VILL-208ENST00000484717 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
VILL-208ENST00000484717 MYO15BQ96JP2 1530 aa33.3■■■□□ 2.92
VILL-208ENST00000484717 NACADO15069 1562 aa33.16■■■□□ 2.9
VILL-208ENST00000484717 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
VILL-208ENST00000484717 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
VILL-208ENST00000484717 SUPT5HO00267 1087 aaKnown RBP32.78■■■□□ 2.84
VILL-208ENST00000484717 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
VILL-208ENST00000484717 PABPN1Q86U42 306 aaKnown RBP eCLIP32.17■■■□□ 2.74
VILL-208ENST00000484717 CECR2Q9BXF3 1484 aa32.14■■■□□ 2.74
VILL-208ENST00000484717 RSF1Q96T23 1441 aaPredicted RBP32.05■■■□□ 2.72
VILL-208ENST00000484717 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
VILL-208ENST00000484717 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
VILL-208ENST00000484717 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
VILL-208ENST00000484717 WIZO95785 1651 aa31.62■■■□□ 2.65
VILL-208ENST00000484717 SMARCA4P51532 1647 aa31.56■■■□□ 2.64
VILL-208ENST00000484717 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
VILL-208ENST00000484717 TOP2AP11388 1531 aaKnown RBP31.16■■■□□ 2.58
VILL-208ENST00000484717 ATAD2BQ9ULI0 1458 aa31.07■■■□□ 2.56
VILL-208ENST00000484717 PEG3Q9GZU2 1588 aa31.06■■■□□ 2.56
VILL-208ENST00000484717 EIF4G1Q04637 1599 aaKnown RBP31.03■■■□□ 2.56
VILL-208ENST00000484717 CCDC88BA6NC98 1476 aa30.99■■■□□ 2.55
VILL-208ENST00000484717 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
VILL-208ENST00000484717 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.53
VILL-208ENST00000484717 NCAPD3P42695 1498 aa30.7■■■□□ 2.51
VILL-208ENST00000484717 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
VILL-208ENST00000484717 HMGXB3Q12766 1538 aa30.59■■■□□ 2.49
VILL-208ENST00000484717 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
VILL-208ENST00000484717 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
VILL-208ENST00000484717 LOC105371045A0A1W2PR82 267 aa30.32■■■□□ 2.44
VILL-208ENST00000484717 FAM9AQ8IZU1 332 aaPredicted RBP30.32■■■□□ 2.44
VILL-208ENST00000484717 DNAJC5BQ9UF47 199 aa30.17■■■□□ 2.42
VILL-208ENST00000484717 WRNQ14191 1432 aaPredicted RBP eCLIP30.12■■■□□ 2.41
VILL-208ENST00000484717 CFTRP13569 1480 aa30.09■■■□□ 2.41
VILL-208ENST00000484717 EHMT2Q96KQ7 1210 aa30.06■■■□□ 2.4
VILL-208ENST00000484717 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
VILL-208ENST00000484717 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
VILL-208ENST00000484717 SOGA1O94964 1423 aa29.95■■■□□ 2.38
VILL-208ENST00000484717 RUSC2Q8N2Y8 1516 aa29.87■■■□□ 2.37
VILL-208ENST00000484717 NESP48681 1621 aa29.86■■■□□ 2.37
VILL-208ENST00000484717 CUX1P39880 1505 aa29.78■■■□□ 2.36
VILL-208ENST00000484717 TOP2BQ02880 1626 aa29.77■■■□□ 2.36
VILL-208ENST00000484717 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
VILL-208ENST00000484717 FANCD2Q9BXW9 1451 aa29.69■■■□□ 2.34
VILL-208ENST00000484717 BIVM-ERCC5R4GMW8 1640 aa29.68■■■□□ 2.34
VILL-208ENST00000484717 CSRNP3Q8WYN3 585 aa29.64■■■□□ 2.34
VILL-208ENST00000484717 EEA1Q15075 1411 aa29.58■■■□□ 2.33
VILL-208ENST00000484717 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
VILL-208ENST00000484717 CEP164Q9UPV0 1460 aa29.43■■■□□ 2.3
VILL-208ENST00000484717 FGD5Q6ZNL6 1462 aa29.43■■■□□ 2.3
VILL-208ENST00000484717 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
VILL-208ENST00000484717 TOPBP1Q92547 1522 aa29.36■■■□□ 2.29
VILL-208ENST00000484717 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
VILL-208ENST00000484717 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
VILL-208ENST00000484717 DNMBPQ6XZF7 1577 aa29.34■■■□□ 2.29
VILL-208ENST00000484717 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
VILL-208ENST00000484717 GOLGA3Q08378 1498 aa29.31■■■□□ 2.28
VILL-208ENST00000484717 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
VILL-208ENST00000484717 CUX2O14529 1486 aa29.29■■■□□ 2.28
VILL-208ENST00000484717 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
VILL-208ENST00000484717 RAPGEF2Q9Y4G8 1499 aa29.28■■■□□ 2.28
VILL-208ENST00000484717 POLA1P09884 1462 aaPredicted RBP29.27■■■□□ 2.28
VILL-208ENST00000484717 TNIKQ9UKE5 1360 aa29.26■■■□□ 2.27
VILL-208ENST00000484717 KIF21BO75037 1637 aa29.24■■■□□ 2.27
VILL-208ENST00000484717 CEP162Q5TB80 1403 aa29.2■■■□□ 2.26
VILL-208ENST00000484717 PRXQ9BXM0 1461 aa29.17■■■□□ 2.26
VILL-208ENST00000484717 IGF1RP08069 1367 aa29.13■■■□□ 2.25
VILL-208ENST00000484717 RANGAP1P46060 587 aaPredicted RBP29.09■■■□□ 2.25
VILL-208ENST00000484717 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
VILL-208ENST00000484717 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
VILL-208ENST00000484717 PCGF6Q9BYE7 350 aa29.01■■■□□ 2.23
VILL-208ENST00000484717 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
VILL-208ENST00000484717 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
VILL-208ENST00000484717 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
VILL-208ENST00000484717 ERCC6Q03468 1493 aa28.97■■■□□ 2.23
VILL-208ENST00000484717 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
VILL-208ENST00000484717 CLIP1P30622 1438 aa28.92■■■□□ 2.22
VILL-208ENST00000484717 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
VILL-208ENST00000484717 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
VILL-208ENST00000484717 WDR62O43379 1518 aa28.85■■■□□ 2.21
VILL-208ENST00000484717 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.2
VILL-208ENST00000484717 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
VILL-208ENST00000484717 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.23e-7■■■■■ 40.3
VILL-208ENST00000484717 TRIM26Q12899 539 aaPredicted RBP28.77■■■□□ 2.2
VILL-208ENST00000484717 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
VILL-208ENST00000484717 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
VILL-208ENST00000484717 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
VILL-208ENST00000484717 IFT140Q96RY7 1462 aa28.68■■■□□ 2.18
VILL-208ENST00000484717 CUL7Q14999 1698 aa28.66■■■□□ 2.18
VILL-208ENST00000484717 ARAP1Q96P48 1450 aa28.64■■■□□ 2.18
VILL-208ENST00000484717 VPS8Q8N3P4 1428 aa28.64■■■□□ 2.18
VILL-208ENST00000484717 ARHGAP35Q9NRY4 1499 aa28.61■■■□□ 2.17
VILL-208ENST00000484717 PBRM1Q86U86 1689 aa28.55■■■□□ 2.16
VILL-208ENST00000484717 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
VILL-208ENST00000484717 P3H3Q8IVL6 736 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms