RNA–Protein interactions for RNA: ENST00000484463.3

RPL38P3-201, Transcript of ribosomal protein L38 pseudogene 3, humanhuman

BASIC

Gene RPL38P3, Length 213 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P3-201ENST00000484463 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
RPL38P3-201ENST00000484463 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
RPL38P3-201ENST00000484463 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
RPL38P3-201ENST00000484463 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
RPL38P3-201ENST00000484463 FOXD1Q16676 465 aa15.9■□□□□ 0.14
RPL38P3-201ENST00000484463 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
RPL38P3-201ENST00000484463 MSH5O43196 834 aa15.1■□□□□ 0.01
RPL38P3-201ENST00000484463 PIAS4Q8N2W9 510 aaPredicted RBP14.84□□□□□ -0.03
RPL38P3-201ENST00000484463 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
RPL38P3-201ENST00000484463 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
RPL38P3-201ENST00000484463 ADRA2BP18089 450 aa14.57□□□□□ -0.08
RPL38P3-201ENST00000484463 NISCHQ9Y2I1 1504 aa13.69□□□□□ -0.22
RPL38P3-201ENST00000484463 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
RPL38P3-201ENST00000484463 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
RPL38P3-201ENST00000484463 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
RPL38P3-201ENST00000484463 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
RPL38P3-201ENST00000484463 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
RPL38P3-201ENST00000484463 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
RPL38P3-201ENST00000484463 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
RPL38P3-201ENST00000484463 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
RPL38P3-201ENST00000484463 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
RPL38P3-201ENST00000484463 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
RPL38P3-201ENST00000484463 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
RPL38P3-201ENST00000484463 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
RPL38P3-201ENST00000484463 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
RPL38P3-201ENST00000484463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
RPL38P3-201ENST00000484463 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
RPL38P3-201ENST00000484463 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
RPL38P3-201ENST00000484463 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
RPL38P3-201ENST00000484463 CAPN15O75808 1086 aa11.93□□□□□ -0.5
RPL38P3-201ENST00000484463 DSG3P32926 999 aa11.87□□□□□ -0.51
RPL38P3-201ENST00000484463 POTEHQ6S545 545 aa11.85□□□□□ -0.51
RPL38P3-201ENST00000484463 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
RPL38P3-201ENST00000484463 APLP2Q06481 763 aa11.76□□□□□ -0.53
RPL38P3-201ENST00000484463 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
RPL38P3-201ENST00000484463 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
RPL38P3-201ENST00000484463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
RPL38P3-201ENST00000484463 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
RPL38P3-201ENST00000484463 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
RPL38P3-201ENST00000484463 KCNA4P22459 653 aa11.61□□□□□ -0.55
RPL38P3-201ENST00000484463 ABCB7O75027 752 aa11.58□□□□□ -0.56
RPL38P3-201ENST00000484463 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
RPL38P3-201ENST00000484463 ZCCHC6Q5VYS8 1495 aaKnown RBP11.54□□□□□ -0.56
RPL38P3-201ENST00000484463 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
RPL38P3-201ENST00000484463 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
RPL38P3-201ENST00000484463 ABCC9O60706 1549 aa11.33□□□□□ -0.6
RPL38P3-201ENST00000484463 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
RPL38P3-201ENST00000484463 POLA2Q14181 598 aa11.26□□□□□ -0.61
RPL38P3-201ENST00000484463 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
RPL38P3-201ENST00000484463 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
RPL38P3-201ENST00000484463 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
RPL38P3-201ENST00000484463 NACADO15069 1562 aa11.15□□□□□ -0.62
RPL38P3-201ENST00000484463 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
RPL38P3-201ENST00000484463 ZBTB12Q9Y330 459 aaPredicted RBP11.09□□□□□ -0.63
RPL38P3-201ENST00000484463 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
RPL38P3-201ENST00000484463 RB1CC1Q8TDY2 1594 aa11.06□□□□□ -0.64
RPL38P3-201ENST00000484463 SCRIBQ14160 1630 aa11.02□□□□□ -0.65
RPL38P3-201ENST00000484463 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
RPL38P3-201ENST00000484463 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
RPL38P3-201ENST00000484463 SLC4A1APQ9BWU0 796 aaKnown RBP10.96□□□□□ -0.65
RPL38P3-201ENST00000484463 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
RPL38P3-201ENST00000484463 ATF5Q9Y2D1 282 aaPredicted RBP10.92□□□□□ -0.66
RPL38P3-201ENST00000484463 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
RPL38P3-201ENST00000484463 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
RPL38P3-201ENST00000484463 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
RPL38P3-201ENST00000484463 HAX1O00165 279 aa10.83□□□□□ -0.68
RPL38P3-201ENST00000484463 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
RPL38P3-201ENST00000484463 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
RPL38P3-201ENST00000484463 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.69
RPL38P3-201ENST00000484463 ATXN8OSP0DMR3 200 aa10.71□□□□□ -0.69
RPL38P3-201ENST00000484463 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
RPL38P3-201ENST00000484463 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
RPL38P3-201ENST00000484463 FBLN2P98095 1184 aa10.69□□□□□ -0.7
RPL38P3-201ENST00000484463 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
RPL38P3-201ENST00000484463 CECR2Q9BXF3 1484 aa10.64□□□□□ -0.71
RPL38P3-201ENST00000484463 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
RPL38P3-201ENST00000484463 RSF1Q96T23 1441 aaPredicted RBP10.6□□□□□ -0.71
RPL38P3-201ENST00000484463 ZBTB22O15209 634 aa10.6□□□□□ -0.71
RPL38P3-201ENST00000484463 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
RPL38P3-201ENST00000484463 MROH2BQ7Z745 1585 aa10.59□□□□□ -0.71
RPL38P3-201ENST00000484463 BAZ1AQ9NRL2 1556 aaPredicted RBP10.58□□□□□ -0.72
RPL38P3-201ENST00000484463 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
RPL38P3-201ENST00000484463 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
RPL38P3-201ENST00000484463 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
RPL38P3-201ENST00000484463 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
RPL38P3-201ENST00000484463 EVX2Q03828 476 aa10.54□□□□□ -0.72
RPL38P3-201ENST00000484463 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
RPL38P3-201ENST00000484463 WIZO95785 1651 aa10.48□□□□□ -0.73
RPL38P3-201ENST00000484463 SSUH2Q9Y2M2 353 aa10.45□□□□□ -0.74
RPL38P3-201ENST00000484463 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
RPL38P3-201ENST00000484463 C19orf67A6NJJ6 358 aa10.44□□□□□ -0.74
RPL38P3-201ENST00000484463 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
RPL38P3-201ENST00000484463 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
RPL38P3-201ENST00000484463 TOP2AP11388 1531 aaKnown RBP10.4□□□□□ -0.74
RPL38P3-201ENST00000484463 GABBR2O75899 941 aa10.37□□□□□ -0.75
RPL38P3-201ENST00000484463 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
RPL38P3-201ENST00000484463 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
RPL38P3-201ENST00000484463 SMARCA2P51531 1590 aa10.36□□□□□ -0.75
RPL38P3-201ENST00000484463 CHADLQ6NUI6 762 aa10.33□□□□□ -0.76
RPL38P3-201ENST00000484463 LHX8Q68G74 356 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms