RNA–Protein interactions for RNA: ENST00000483225.5

CXXC1P1-201, Transcript of CXXC finger protein 1 pseudogene 1, humanhuman

TSL 2 BASIC

Gene CXXC1P1, Length 1,897 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1P1-201ENST00000483225 NISCHQ9Y2I1 1504 aa39.01■■■■□ 3.84
CXXC1P1-201ENST00000483225 CCDC180Q9P1Z9 1646 aa33.84■■■■□ 3.01
CXXC1P1-201ENST00000483225 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
CXXC1P1-201ENST00000483225 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
CXXC1P1-201ENST00000483225 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
CXXC1P1-201ENST00000483225 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
CXXC1P1-201ENST00000483225 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
CXXC1P1-201ENST00000483225 ABCC9O60706 1549 aa31.72■■■□□ 2.67
CXXC1P1-201ENST00000483225 NACADO15069 1562 aa31.44■■■□□ 2.62
CXXC1P1-201ENST00000483225 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
CXXC1P1-201ENST00000483225 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
CXXC1P1-201ENST00000483225 SUPT5HO00267 1087 aaKnown RBP31.06■■■□□ 2.56
CXXC1P1-201ENST00000483225 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
CXXC1P1-201ENST00000483225 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
CXXC1P1-201ENST00000483225 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
CXXC1P1-201ENST00000483225 MROH2BQ7Z745 1585 aa30.16■■■□□ 2.42
CXXC1P1-201ENST00000483225 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
CXXC1P1-201ENST00000483225 BAZ1AQ9NRL2 1556 aaPredicted RBP30.09■■■□□ 2.41
CXXC1P1-201ENST00000483225 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
CXXC1P1-201ENST00000483225 WIZO95785 1651 aa29.93■■■□□ 2.38
CXXC1P1-201ENST00000483225 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
CXXC1P1-201ENST00000483225 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
CXXC1P1-201ENST00000483225 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
CXXC1P1-201ENST00000483225 PEG3Q9GZU2 1588 aa29.53■■■□□ 2.32
CXXC1P1-201ENST00000483225 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
CXXC1P1-201ENST00000483225 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
CXXC1P1-201ENST00000483225 ATAD2BQ9ULI0 1458 aa29.34■■■□□ 2.29
CXXC1P1-201ENST00000483225 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
CXXC1P1-201ENST00000483225 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.27
CXXC1P1-201ENST00000483225 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
CXXC1P1-201ENST00000483225 NCAPD3P42695 1498 aa29.03■■■□□ 2.24
CXXC1P1-201ENST00000483225 HMGXB3Q12766 1538 aa29.01■■■□□ 2.23
CXXC1P1-201ENST00000483225 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
CXXC1P1-201ENST00000483225 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
CXXC1P1-201ENST00000483225 CC2D2AQ9P2K1 1620 aa28.7■■■□□ 2.18
CXXC1P1-201ENST00000483225 FAM9AQ8IZU1 332 aaPredicted RBP28.66■■■□□ 2.18
CXXC1P1-201ENST00000483225 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
CXXC1P1-201ENST00000483225 CFTRP13569 1480 aa28.48■■■□□ 2.15
CXXC1P1-201ENST00000483225 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
CXXC1P1-201ENST00000483225 EEA1Q15075 1411 aa28.39■■■□□ 2.14
CXXC1P1-201ENST00000483225 SOGA1O94964 1423 aa28.38■■■□□ 2.13
CXXC1P1-201ENST00000483225 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
CXXC1P1-201ENST00000483225 PRDM2Q13029 1718 aa28.33■■■□□ 2.13
CXXC1P1-201ENST00000483225 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
CXXC1P1-201ENST00000483225 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
CXXC1P1-201ENST00000483225 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
CXXC1P1-201ENST00000483225 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
CXXC1P1-201ENST00000483225 CSRNP3Q8WYN3 585 aa28.21■■■□□ 2.11
CXXC1P1-201ENST00000483225 CUX1P39880 1505 aa28.18■■■□□ 2.1
CXXC1P1-201ENST00000483225 GOLGA3Q08378 1498 aa28.02■■■□□ 2.08
CXXC1P1-201ENST00000483225 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.07
CXXC1P1-201ENST00000483225 TNIKQ9UKE5 1360 aa28■■■□□ 2.07
CXXC1P1-201ENST00000483225 KIF21BO75037 1637 aa27.99■■■□□ 2.07
CXXC1P1-201ENST00000483225 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
CXXC1P1-201ENST00000483225 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
CXXC1P1-201ENST00000483225 NESP48681 1621 aa27.96■■■□□ 2.07
CXXC1P1-201ENST00000483225 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.05
CXXC1P1-201ENST00000483225 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
CXXC1P1-201ENST00000483225 CEP162Q5TB80 1403 aa27.88■■■□□ 2.05
CXXC1P1-201ENST00000483225 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
CXXC1P1-201ENST00000483225 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
CXXC1P1-201ENST00000483225 FGD5Q6ZNL6 1462 aa27.82■■■□□ 2.04
CXXC1P1-201ENST00000483225 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
CXXC1P1-201ENST00000483225 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
CXXC1P1-201ENST00000483225 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.03
CXXC1P1-201ENST00000483225 PRXQ9BXM0 1461 aa27.76■■■□□ 2.03
CXXC1P1-201ENST00000483225 TRIM26Q12899 539 aaPredicted RBP27.75■■■□□ 2.03
CXXC1P1-201ENST00000483225 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
CXXC1P1-201ENST00000483225 TOPBP1Q92547 1522 aa27.74■■■□□ 2.03
CXXC1P1-201ENST00000483225 CUX2O14529 1486 aa27.71■■■□□ 2.03
CXXC1P1-201ENST00000483225 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.01
CXXC1P1-201ENST00000483225 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
CXXC1P1-201ENST00000483225 KIF21AQ7Z4S6 1674 aa27.6■■■□□ 2.01
CXXC1P1-201ENST00000483225 CLIP1P30622 1438 aa27.59■■■□□ 2.01
CXXC1P1-201ENST00000483225 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
CXXC1P1-201ENST00000483225 IGF1RP08069 1367 aa27.57■■■□□ 2
CXXC1P1-201ENST00000483225 RAD54L2Q9Y4B4 1467 aa27.55■■■□□ 2
CXXC1P1-201ENST00000483225 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
CXXC1P1-201ENST00000483225 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
CXXC1P1-201ENST00000483225 HRCP23327 699 aa27.42■■□□□ 1.98
CXXC1P1-201ENST00000483225 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
CXXC1P1-201ENST00000483225 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.98
CXXC1P1-201ENST00000483225 MRC2Q9UBG0 1479 aa27.39■■□□□ 1.97
CXXC1P1-201ENST00000483225 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
CXXC1P1-201ENST00000483225 CUL7Q14999 1698 aa27.32■■□□□ 1.96
CXXC1P1-201ENST00000483225 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
CXXC1P1-201ENST00000483225 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
CXXC1P1-201ENST00000483225 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
CXXC1P1-201ENST00000483225 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
CXXC1P1-201ENST00000483225 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
CXXC1P1-201ENST00000483225 WDR62O43379 1518 aa27.22■■□□□ 1.95
CXXC1P1-201ENST00000483225 ARHGAP35Q9NRY4 1499 aa27.2■■□□□ 1.94
CXXC1P1-201ENST00000483225 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
CXXC1P1-201ENST00000483225 APLP2Q06481 763 aa27.14■■□□□ 1.94
CXXC1P1-201ENST00000483225 TTBK1Q5TCY1 1321 aaPredicted RBP27.13■■□□□ 1.93
CXXC1P1-201ENST00000483225 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
CXXC1P1-201ENST00000483225 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
CXXC1P1-201ENST00000483225 CTTNBP2Q8WZ74 1663 aa27.06■■□□□ 1.92
CXXC1P1-201ENST00000483225 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
CXXC1P1-201ENST00000483225 AQRO60306 1485 aaKnown RBP eCLIP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms