RNA–Protein interactions for RNA: ENST00000482278.5

TUBGCP2-208, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 2

Gene TUBGCP2, Length 3,553 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-208ENST00000482278 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
TUBGCP2-208ENST00000482278 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
TUBGCP2-208ENST00000482278 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
TUBGCP2-208ENST00000482278 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
TUBGCP2-208ENST00000482278 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
TUBGCP2-208ENST00000482278 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
TUBGCP2-208ENST00000482278 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
TUBGCP2-208ENST00000482278 ABCC9O60706 1549 aa20.23■□□□□ 0.83
TUBGCP2-208ENST00000482278 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
TUBGCP2-208ENST00000482278 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
TUBGCP2-208ENST00000482278 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.78
TUBGCP2-208ENST00000482278 NACADO15069 1562 aa19.82■□□□□ 0.76
TUBGCP2-208ENST00000482278 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
TUBGCP2-208ENST00000482278 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
TUBGCP2-208ENST00000482278 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
TUBGCP2-208ENST00000482278 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
TUBGCP2-208ENST00000482278 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
TUBGCP2-208ENST00000482278 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.686e-7■■■■□ 22.8
TUBGCP2-208ENST00000482278 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
TUBGCP2-208ENST00000482278 WIZO95785 1651 aa19.28■□□□□ 0.68
TUBGCP2-208ENST00000482278 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
TUBGCP2-208ENST00000482278 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
TUBGCP2-208ENST00000482278 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
TUBGCP2-208ENST00000482278 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
TUBGCP2-208ENST00000482278 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
TUBGCP2-208ENST00000482278 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
TUBGCP2-208ENST00000482278 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
TUBGCP2-208ENST00000482278 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
TUBGCP2-208ENST00000482278 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
TUBGCP2-208ENST00000482278 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
TUBGCP2-208ENST00000482278 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
TUBGCP2-208ENST00000482278 HRCP23327 699 aa18.83■□□□□ 0.6
TUBGCP2-208ENST00000482278 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
TUBGCP2-208ENST00000482278 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
TUBGCP2-208ENST00000482278 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
TUBGCP2-208ENST00000482278 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
TUBGCP2-208ENST00000482278 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
TUBGCP2-208ENST00000482278 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
TUBGCP2-208ENST00000482278 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
TUBGCP2-208ENST00000482278 MYT1Q01538 1121 aa18.56■□□□□ 0.56
TUBGCP2-208ENST00000482278 SOGA1O94964 1423 aa18.56■□□□□ 0.56
TUBGCP2-208ENST00000482278 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.55
TUBGCP2-208ENST00000482278 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
TUBGCP2-208ENST00000482278 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
TUBGCP2-208ENST00000482278 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
TUBGCP2-208ENST00000482278 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
TUBGCP2-208ENST00000482278 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
TUBGCP2-208ENST00000482278 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
TUBGCP2-208ENST00000482278 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
TUBGCP2-208ENST00000482278 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
TUBGCP2-208ENST00000482278 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
TUBGCP2-208ENST00000482278 EEA1Q15075 1411 aa18.23■□□□□ 0.51
TUBGCP2-208ENST00000482278 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
TUBGCP2-208ENST00000482278 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
TUBGCP2-208ENST00000482278 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
TUBGCP2-208ENST00000482278 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
TUBGCP2-208ENST00000482278 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
TUBGCP2-208ENST00000482278 CFTRP13569 1480 aa18.13■□□□□ 0.49
TUBGCP2-208ENST00000482278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
TUBGCP2-208ENST00000482278 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
TUBGCP2-208ENST00000482278 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
TUBGCP2-208ENST00000482278 CUX1P39880 1505 aa18.08■□□□□ 0.48
TUBGCP2-208ENST00000482278 KIF21BO75037 1637 aa18.04■□□□□ 0.48
TUBGCP2-208ENST00000482278 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
TUBGCP2-208ENST00000482278 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
TUBGCP2-208ENST00000482278 ZEB1P37275 1124 aaPredicted RBP18.02■□□□□ 0.48
TUBGCP2-208ENST00000482278 CLIP1P30622 1438 aa18■□□□□ 0.47
TUBGCP2-208ENST00000482278 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
TUBGCP2-208ENST00000482278 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
TUBGCP2-208ENST00000482278 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
TUBGCP2-208ENST00000482278 NESP48681 1621 aa17.9■□□□□ 0.46
TUBGCP2-208ENST00000482278 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
TUBGCP2-208ENST00000482278 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
TUBGCP2-208ENST00000482278 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
TUBGCP2-208ENST00000482278 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
TUBGCP2-208ENST00000482278 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
TUBGCP2-208ENST00000482278 CUX2O14529 1486 aa17.84■□□□□ 0.45
TUBGCP2-208ENST00000482278 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
TUBGCP2-208ENST00000482278 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
TUBGCP2-208ENST00000482278 APLP2Q06481 763 aa17.8■□□□□ 0.44
TUBGCP2-208ENST00000482278 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
TUBGCP2-208ENST00000482278 IGF1RP08069 1367 aa17.77■□□□□ 0.43
TUBGCP2-208ENST00000482278 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
TUBGCP2-208ENST00000482278 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
TUBGCP2-208ENST00000482278 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
TUBGCP2-208ENST00000482278 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
TUBGCP2-208ENST00000482278 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
TUBGCP2-208ENST00000482278 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
TUBGCP2-208ENST00000482278 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
TUBGCP2-208ENST00000482278 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
TUBGCP2-208ENST00000482278 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
TUBGCP2-208ENST00000482278 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
TUBGCP2-208ENST00000482278 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
TUBGCP2-208ENST00000482278 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
TUBGCP2-208ENST00000482278 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
TUBGCP2-208ENST00000482278 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
TUBGCP2-208ENST00000482278 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
TUBGCP2-208ENST00000482278 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
TUBGCP2-208ENST00000482278 TDRD9Q8NDG6 1382 aaKnown RBP17.57■□□□□ 0.4
TUBGCP2-208ENST00000482278 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms