RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-208ENST00000480994 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
NECAB3-208ENST00000480994 CCDC180Q9P1Z9 1646 aa37.52■■■■□ 3.6
NECAB3-208ENST00000480994 ABCC9O60706 1549 aa36.6■■■■□ 3.45
NECAB3-208ENST00000480994 RB1CC1Q8TDY2 1594 aa35.29■■■■□ 3.24
NECAB3-208ENST00000480994 NACADO15069 1562 aa35.21■■■■□ 3.23
NECAB3-208ENST00000480994 MYO15BQ96JP2 1530 aa34.98■■■■□ 3.19
NECAB3-208ENST00000480994 ZCCHC6Q5VYS8 1495 aaKnown RBP34.85■■■■□ 3.17
NECAB3-208ENST00000480994 DCAF1Q9Y4B6 1507 aa34.73■■■■□ 3.15
NECAB3-208ENST00000480994 UNC13AQ9UPW8 1703 aa34.67■■■■□ 3.14
NECAB3-208ENST00000480994 DCAF8L2P0C7V8 631 aa34.66■■■■□ 3.14
NECAB3-208ENST00000480994 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
NECAB3-208ENST00000480994 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.047e-9■■□□□ 11.9
NECAB3-208ENST00000480994 SCRIBQ14160 1630 aa34.01■■■■□ 3.03
NECAB3-208ENST00000480994 SHROOM4Q9ULL8 1493 aa33.96■■■■□ 3.03
NECAB3-208ENST00000480994 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
NECAB3-208ENST00000480994 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
NECAB3-208ENST00000480994 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
NECAB3-208ENST00000480994 CECR2Q9BXF3 1484 aa32.96■■■□□ 2.87
NECAB3-208ENST00000480994 SMARCA4P51532 1647 aa32.59■■■□□ 2.81
NECAB3-208ENST00000480994 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
NECAB3-208ENST00000480994 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
NECAB3-208ENST00000480994 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
NECAB3-208ENST00000480994 ATAD2BQ9ULI0 1458 aa32.37■■■□□ 2.77
NECAB3-208ENST00000480994 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
NECAB3-208ENST00000480994 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
NECAB3-208ENST00000480994 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
NECAB3-208ENST00000480994 BAZ1BQ9UIG0 1483 aaKnown RBP32.09■■■□□ 2.73
NECAB3-208ENST00000480994 WIZO95785 1651 aa31.9■■■□□ 2.7
NECAB3-208ENST00000480994 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
NECAB3-208ENST00000480994 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
NECAB3-208ENST00000480994 NESP48681 1621 aa31.64■■■□□ 2.65
NECAB3-208ENST00000480994 ERCC6Q03468 1493 aa31.59■■■□□ 2.65
NECAB3-208ENST00000480994 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
NECAB3-208ENST00000480994 CUX2O14529 1486 aa31.46■■■□□ 2.63
NECAB3-208ENST00000480994 KIF21AQ7Z4S6 1674 aa31.45■■■□□ 2.63
NECAB3-208ENST00000480994 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
NECAB3-208ENST00000480994 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
NECAB3-208ENST00000480994 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
NECAB3-208ENST00000480994 PRDM2Q13029 1718 aa31.26■■■□□ 2.59
NECAB3-208ENST00000480994 CFTRP13569 1480 aa31.22■■■□□ 2.59
NECAB3-208ENST00000480994 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
NECAB3-208ENST00000480994 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
NECAB3-208ENST00000480994 WDR62O43379 1518 aa31.07■■■□□ 2.56
NECAB3-208ENST00000480994 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
NECAB3-208ENST00000480994 FANCD2Q9BXW9 1451 aa31.06■■■□□ 2.56
NECAB3-208ENST00000480994 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
NECAB3-208ENST00000480994 DNAJC5Q9H3Z4 198 aa30.6■■■□□ 2.49
NECAB3-208ENST00000480994 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
NECAB3-208ENST00000480994 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
NECAB3-208ENST00000480994 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
NECAB3-208ENST00000480994 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
NECAB3-208ENST00000480994 IFT140Q96RY7 1462 aa30.43■■■□□ 2.46
NECAB3-208ENST00000480994 TARBP1Q13395 1621 aaKnown RBP30.34■■■□□ 2.45
NECAB3-208ENST00000480994 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
NECAB3-208ENST00000480994 EIF4G3O43432 1585 aaKnown RBP30.27■■■□□ 2.44
NECAB3-208ENST00000480994 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
NECAB3-208ENST00000480994 CUX1P39880 1505 aa30.25■■■□□ 2.43
NECAB3-208ENST00000480994 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
NECAB3-208ENST00000480994 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
NECAB3-208ENST00000480994 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
NECAB3-208ENST00000480994 BIVM-ERCC5R4GMW8 1640 aa30.06■■■□□ 2.4
NECAB3-208ENST00000480994 SOGA1O94964 1423 aa30.05■■■□□ 2.4
NECAB3-208ENST00000480994 TOP2BQ02880 1626 aa30■■■□□ 2.39
NECAB3-208ENST00000480994 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.394e-8■■■■■ 28.5
NECAB3-208ENST00000480994 CHD1O14646 1710 aa29.98■■■□□ 2.39
NECAB3-208ENST00000480994 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
NECAB3-208ENST00000480994 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
NECAB3-208ENST00000480994 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
NECAB3-208ENST00000480994 WRNQ14191 1432 aaPredicted RBP eCLIP29.9■■■□□ 2.38
NECAB3-208ENST00000480994 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
NECAB3-208ENST00000480994 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
NECAB3-208ENST00000480994 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
NECAB3-208ENST00000480994 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
NECAB3-208ENST00000480994 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
NECAB3-208ENST00000480994 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
NECAB3-208ENST00000480994 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
NECAB3-208ENST00000480994 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
NECAB3-208ENST00000480994 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
NECAB3-208ENST00000480994 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
NECAB3-208ENST00000480994 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
NECAB3-208ENST00000480994 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
NECAB3-208ENST00000480994 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
NECAB3-208ENST00000480994 ADAMTS12P58397 1594 aa29.6■■■□□ 2.33
NECAB3-208ENST00000480994 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
NECAB3-208ENST00000480994 FBLN2P98095 1184 aa29.53■■■□□ 2.32
NECAB3-208ENST00000480994 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
NECAB3-208ENST00000480994 GRIN2AQ12879 1464 aa29.45■■■□□ 2.31
NECAB3-208ENST00000480994 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
NECAB3-208ENST00000480994 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
NECAB3-208ENST00000480994 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
NECAB3-208ENST00000480994 NUP160Q12769 1436 aa29.35■■■□□ 2.29
NECAB3-208ENST00000480994 CUL7Q14999 1698 aa29.33■■■□□ 2.29
NECAB3-208ENST00000480994 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
NECAB3-208ENST00000480994 KIF27Q86VH2 1401 aa29.29■■■□□ 2.28
NECAB3-208ENST00000480994 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
NECAB3-208ENST00000480994 RUSC2Q8N2Y8 1516 aa29.19■■■□□ 2.26
NECAB3-208ENST00000480994 IGF1RP08069 1367 aa29.16■■■□□ 2.26
NECAB3-208ENST00000480994 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
NECAB3-208ENST00000480994 ERCC6L2Q5T890 1561 aa29.08■■■□□ 2.25
NECAB3-208ENST00000480994 CARMIL1Q5VZK9 1371 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms