RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-208ENST00000480994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.9■□□□□ 0.463e-6■■■■■ 185.4
NECAB3-208ENST00000480994 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■■■■■ 163.7
NECAB3-208ENST00000480994 SF3B1O75533 1304 aaKnown RBP eCLIP18.51■□□□□ 0.554e-6■■■■■ 86.2
NECAB3-208ENST00000480994 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.82■□□□□ 0.124e-7■■■■■ 58.1
NECAB3-208ENST00000480994 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.391e-5■■■■■ 49.7
NECAB3-208ENST00000480994 FKBP4Q02790 459 aaKnown RBP eCLIP21.75■■□□□ 1.071e-7■■■■■ 43.7
NECAB3-208ENST00000480994 AARSP49588 968 aaKnown RBP eCLIP18.38■□□□□ 0.536e-8■■■■■ 39.3
NECAB3-208ENST00000480994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.775e-7■■■■■ 29.7
NECAB3-208ENST00000480994 EIF4G2P78344 907 aaKnown RBP eCLIP23.58■■□□□ 1.371e-8■■■■■ 29.7
NECAB3-208ENST00000480994 HNRNPKP61978 463 aaKnown RBP eCLIP17.01■□□□□ 0.311e-8■■■■■ 28.7
NECAB3-208ENST00000480994 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.394e-8■■■■■ 28.5
NECAB3-208ENST00000480994 SF3B4Q15427 424 aaKnown RBP eCLIP15.38■□□□□ 0.052e-10■■■■■ 27.7
NECAB3-208ENST00000480994 DDX6P26196 483 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■■■□ 26
NECAB3-208ENST00000480994 GTF2F1P35269 517 aaKnown RBP eCLIP18.64■□□□□ 0.578e-7■■■■□ 24.7
NECAB3-208ENST00000480994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.54■□□□□ 0.44e-12■■■■□ 24.3
NECAB3-208ENST00000480994 LSM11P83369 360 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■■□ 24.3
NECAB3-208ENST00000480994 NONOQ15233 471 aaKnown RBP eCLIP19.16■□□□□ 0.666e-7■■■■□ 23.5
NECAB3-208ENST00000480994 AATFQ9NY61 560 aaKnown RBP eCLIP20.6■□□□□ 0.892e-8■■■■□ 22.6
NECAB3-208ENST00000480994 TARDBPQ13148 414 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■■■□ 22.1
NECAB3-208ENST00000480994 PCBP1Q15365 356 aaKnown RBP eCLIP18.84■□□□□ 0.614e-7■■■■□ 21.8
NECAB3-208ENST00000480994 EFTUD2Q15029 972 aaKnown RBP eCLIP16■□□□□ 0.158e-8■■■■□ 21
NECAB3-208ENST00000480994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.58■■■□□ 2.013e-6■■■■□ 20.9
NECAB3-208ENST00000480994 PPIGQ13427 754 aaKnown RBP eCLIP19.41■□□□□ 0.76e-10■■■■□ 20.8
NECAB3-208ENST00000480994 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.612e-6■■■■□ 20.4
NECAB3-208ENST00000480994 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.8■□□□□ 0.121e-6■■■■□ 20.1
NECAB3-208ENST00000480994 NCBP2P52298 156 aaKnown RBP eCLIP15.48■□□□□ 0.071e-10■■■■□ 20
NECAB3-208ENST00000480994 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.874e-7■■■■□ 19.8
NECAB3-208ENST00000480994 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.322e-9■■■■□ 19.7
NECAB3-208ENST00000480994 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.747e-7■■■■□ 19.4
NECAB3-208ENST00000480994 PCBP2Q15366 365 aaKnown RBP eCLIP15.89■□□□□ 0.132e-7■■■□□ 19.2
NECAB3-208ENST00000480994 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■■■□□ 18.4
NECAB3-208ENST00000480994 EWSR1Q01844 656 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■□□ 17.6
NECAB3-208ENST00000480994 TIA1P31483 386 aaKnown RBP eCLIP15.62■□□□□ 0.092e-6■■■□□ 17.6
NECAB3-208ENST00000480994 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.57■□□□□ 0.085e-7■■■□□ 17.2
NECAB3-208ENST00000480994 PRPF4O43172 522 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■■□□ 16
NECAB3-208ENST00000480994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.29■□□□□ 0.529e-9■■■□□ 15.6
NECAB3-208ENST00000480994 NKRFO15226 690 aaKnown RBP eCLIP19.59■□□□□ 0.736e-7■■■□□ 15.5
NECAB3-208ENST00000480994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.61□□□□□ -0.074e-9■■■□□ 15.2
NECAB3-208ENST00000480994 RBM5P52756 815 aaKnown RBP eCLIP20.92■□□□□ 0.946e-7■■■□□ 15.1
NECAB3-208ENST00000480994 SF3A3Q12874 501 aaKnown RBP eCLIP14.83□□□□□ -0.048e-7■■□□□ 14.5
NECAB3-208ENST00000480994 SRSF1Q07955 248 aaKnown RBP eCLIP15.85■□□□□ 0.131e-10■■□□□ 14.5
NECAB3-208ENST00000480994 CDC40O60508 579 aaKnown RBP eCLIP15.52■□□□□ 0.088e-13■■□□□ 14.2
NECAB3-208ENST00000480994 ZNF622Q969S3 477 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■■□□□ 14.2
NECAB3-208ENST00000480994 RBM22Q9NW64 420 aaKnown RBP eCLIP16.95■□□□□ 0.38e-6■■□□□ 12.7
NECAB3-208ENST00000480994 U2AF1Q01081 240 aaKnown RBP eCLIP22.59■■□□□ 1.212e-6■■□□□ 12.5
NECAB3-208ENST00000480994 SMNDC1O75940 238 aaKnown RBP eCLIP15.11■□□□□ 0.014e-6■■□□□ 12.4
NECAB3-208ENST00000480994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.12■□□□□ 0.812e-6■■□□□ 12.1
NECAB3-208ENST00000480994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.98■□□□□ 0.791e-7■■□□□ 12.1
NECAB3-208ENST00000480994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■□□□ 12
NECAB3-208ENST00000480994 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.047e-9■■□□□ 11.9
NECAB3-208ENST00000480994 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.35■□□□□ 0.693e-11■■□□□ 11.8
NECAB3-208ENST00000480994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.86■■□□□ 1.732e-7■□□□□ 11.2
NECAB3-208ENST00000480994 U2AF2P26368 475 aaKnown RBP eCLIP18.94■□□□□ 0.625e-10■□□□□ 11.1
NECAB3-208ENST00000480994 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.01■□□□□ 0.796e-8■□□□□ 10.7
NECAB3-208ENST00000480994 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.74e-6■□□□□ 10.4
NECAB3-208ENST00000480994 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.288e-10■□□□□ 9.8
NECAB3-208ENST00000480994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.67■■□□□ 1.383e-6■□□□□ 9.1
NECAB3-208ENST00000480994 PTBP1P26599 531 aaKnown RBP eCLIP12.92□□□□□ -0.346e-7■□□□□ 9.1
NECAB3-208ENST00000480994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.26■□□□□ 0.353e-7■□□□□ 8.6
NECAB3-208ENST00000480994 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.04□□□□□ -0.166e-8■□□□□ 8.3
NECAB3-208ENST00000480994 TAF15Q92804 592 aaKnown RBP eCLIP13.73□□□□□ -0.215e-6■□□□□ 8.2
NECAB3-208ENST00000480994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.75■□□□□ 0.919e-11■□□□□ 8.1
Retrieved 62 of 62 RNA–protein pairs in 9.6 ms