RNA–Protein interactions for RNA: ENST00000479785.1

TRBV12-1-201, Transcript of T cell receptor beta variable 12-1 (pseudogene), humanhuman

BASIC

Gene TRBV12-1, Length 344 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-1-201ENST00000479785 AEBP2Q6ZN18 517 aaPredicted RBP8.62□□□□□ -1.03
TRBV12-1-201ENST00000479785 CHIC1Q5VXU3 224 aa8.61□□□□□ -1.03
TRBV12-1-201ENST00000479785 SENP3Q9H4L4 574 aaPredicted RBP7.5□□□□□ -1.21
TRBV12-1-201ENST00000479785 PHF23Q9BUL5 403 aaPredicted RBP7.46□□□□□ -1.22
TRBV12-1-201ENST00000479785 PLPPR3Q6T4P5 718 aa7.09□□□□□ -1.27
TRBV12-1-201ENST00000479785 DNAJC5BQ9UF47 199 aa6.91□□□□□ -1.3
TRBV12-1-201ENST00000479785 FOXD1Q16676 465 aa6.81□□□□□ -1.32
TRBV12-1-201ENST00000479785 DNAJC5Q9H3Z4 198 aa6.78□□□□□ -1.32
TRBV12-1-201ENST00000479785 ABCC9O60706 1549 aa6.76□□□□□ -1.33
TRBV12-1-201ENST00000479785 ADRA2BP18089 450 aa6.57□□□□□ -1.36
TRBV12-1-201ENST00000479785 PPP6R1Q9UPN7 881 aa6.53□□□□□ -1.36
TRBV12-1-201ENST00000479785 PIAS4Q8N2W9 510 aaPredicted RBP6.52□□□□□ -1.37
TRBV12-1-201ENST00000479785 NISCHQ9Y2I1 1504 aa6.47□□□□□ -1.37
TRBV12-1-201ENST00000479785 MSH5O43196 834 aa6.41□□□□□ -1.38
TRBV12-1-201ENST00000479785 TRIM41Q8WV44 630 aa6.37□□□□□ -1.39
TRBV12-1-201ENST00000479785 PABPN1Q86U42 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRBV12-1-201ENST00000479785 SCAF1Q9H7N4 1312 aaKnown RBP6.23□□□□□ -1.41
TRBV12-1-201ENST00000479785 PPP4R3CPQ6ZMV5 832 aa6.18□□□□□ -1.42
TRBV12-1-201ENST00000479785 NCBP3Q53F19 620 aaKnown RBP6.17□□□□□ -1.42
TRBV12-1-201ENST00000479785 CECR2Q9BXF3 1484 aa6.12□□□□□ -1.43
TRBV12-1-201ENST00000479785 RB1CC1Q8TDY2 1594 aa6.08□□□□□ -1.44
TRBV12-1-201ENST00000479785 KCNA4P22459 653 aa6.06□□□□□ -1.44
TRBV12-1-201ENST00000479785 CNKSR2Q8WXI2 1034 aa6.06□□□□□ -1.44
TRBV12-1-201ENST00000479785 DCAF8L2P0C7V8 631 aa6.02□□□□□ -1.45
TRBV12-1-201ENST00000479785 CC2D2AQ9P2K1 1620 aa6.02□□□□□ -1.45
TRBV12-1-201ENST00000479785 ILDR1Q86SU0 546 aaPredicted RBP6□□□□□ -1.45
TRBV12-1-201ENST00000479785 CCDC180Q9P1Z9 1646 aa5.99□□□□□ -1.45
TRBV12-1-201ENST00000479785 CUX2O14529 1486 aa5.97□□□□□ -1.45
TRBV12-1-201ENST00000479785 UNC13AQ9UPW8 1703 aa5.94□□□□□ -1.46
TRBV12-1-201ENST00000479785 DMRT2Q9Y5R5 561 aa5.94□□□□□ -1.46
TRBV12-1-201ENST00000479785 NPM3O75607 178 aaKnown RBP5.93□□□□□ -1.46
TRBV12-1-201ENST00000479785 RNF216Q9NWF9 866 aaPredicted RBP5.92□□□□□ -1.46
TRBV12-1-201ENST00000479785 ERCC6Q03468 1493 aa5.9□□□□□ -1.47
TRBV12-1-201ENST00000479785 TRHP20396 242 aaPredicted RBP5.89□□□□□ -1.47
TRBV12-1-201ENST00000479785 MAPK8IP2Q13387 824 aaPredicted RBP5.89□□□□□ -1.47
TRBV12-1-201ENST00000479785 BICRAQ9NZM4 1560 aa5.89□□□□□ -1.47
TRBV12-1-201ENST00000479785 SLC4A1APQ9BWU0 796 aaKnown RBP5.87□□□□□ -1.47
TRBV12-1-201ENST00000479785 NACADO15069 1562 aa5.85□□□□□ -1.47
TRBV12-1-201ENST00000479785 HOXD11P31277 338 aaPredicted RBP5.85□□□□□ -1.47
TRBV12-1-201ENST00000479785 EIF4G1Q04637 1599 aaKnown RBP5.82□□□□□ -1.48
TRBV12-1-201ENST00000479785 OSCARQ8IYS5 282 aa5.74□□□□□ -1.49
TRBV12-1-201ENST00000479785 EHMT2Q96KQ7 1210 aa5.71□□□□□ -1.5
TRBV12-1-201ENST00000479785 CYB5RLQ6IPT4 315 aa5.7□□□□□ -1.5
TRBV12-1-201ENST00000479785 DCAF8L1A6NGE4 600 aa5.68□□□□□ -1.5
TRBV12-1-201ENST00000479785 FOXD4L1Q9NU39 408 aa5.66□□□□□ -1.5
TRBV12-1-201ENST00000479785 RIMBP3CA6NJZ7 1639 aa5.65□□□□□ -1.51
TRBV12-1-201ENST00000479785 RIMBP3BA6NNM3 1639 aa5.65□□□□□ -1.51
TRBV12-1-201ENST00000479785 RIMBP3Q9UFD9 1639 aa5.65□□□□□ -1.51
TRBV12-1-201ENST00000479785 SHROOM4Q9ULL8 1493 aa5.64□□□□□ -1.51
TRBV12-1-201ENST00000479785 BAZ1AQ9NRL2 1556 aaPredicted RBP5.62□□□□□ -1.51
TRBV12-1-201ENST00000479785 NESP48681 1621 aa5.62□□□□□ -1.51
TRBV12-1-201ENST00000479785 LMTK3Q96Q04 1460 aa5.61□□□□□ -1.51
TRBV12-1-201ENST00000479785 SOCS7O14512 581 aa5.6□□□□□ -1.51
TRBV12-1-201ENST00000479785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.6□□□□□ -1.51
TRBV12-1-201ENST00000479785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.59□□□□□ -1.51
TRBV12-1-201ENST00000479785 HNRNPUL2Q1KMD3 747 aaKnown RBP5.59□□□□□ -1.51
TRBV12-1-201ENST00000479785 POTEDQ86YR6 584 aa5.59□□□□□ -1.51
TRBV12-1-201ENST00000479785 CSRNP3Q8WYN3 585 aa5.59□□□□□ -1.51
TRBV12-1-201ENST00000479785 SCRIBQ14160 1630 aa5.59□□□□□ -1.52
TRBV12-1-201ENST00000479785 SMARCA2P51531 1590 aa5.59□□□□□ -1.52
TRBV12-1-201ENST00000479785 MYCNP04198 464 aaPredicted RBP5.58□□□□□ -1.52
TRBV12-1-201ENST00000479785 THOC2Q8NI27 1593 aaKnown RBP5.58□□□□□ -1.52
TRBV12-1-201ENST00000479785 APLP2Q06481 763 aa5.56□□□□□ -1.52
TRBV12-1-201ENST00000479785 ARHGEF11O15085 1522 aa5.55□□□□□ -1.52
TRBV12-1-201ENST00000479785 ILDR2Q71H61 639 aa5.55□□□□□ -1.52
TRBV12-1-201ENST00000479785 SLC4A2P04920 1241 aa5.54□□□□□ -1.52
TRBV12-1-201ENST00000479785 FBXO41Q8TF61 875 aa5.54□□□□□ -1.52
TRBV12-1-201ENST00000479785 SAMD1Q6SPF0 538 aaPredicted RBP5.53□□□□□ -1.52
TRBV12-1-201ENST00000479785 ZBTB22O15209 634 aa5.52□□□□□ -1.53
TRBV12-1-201ENST00000479785 ATXN8OSP0DMR3 200 aa5.52□□□□□ -1.53
TRBV12-1-201ENST00000479785 KIF21AQ7Z4S6 1674 aa5.5□□□□□ -1.53
TRBV12-1-201ENST00000479785 DISP3Q9P2K9 1392 aa5.49□□□□□ -1.53
TRBV12-1-201ENST00000479785 KDM4FA0A1W2PPD8 638 aa5.48□□□□□ -1.53
TRBV12-1-201ENST00000479785 MYO15BQ96JP2 1530 aa5.46□□□□□ -1.54
TRBV12-1-201ENST00000479785 U3KPZ7 1027 aaPredicted RBP5.45□□□□□ -1.54
TRBV12-1-201ENST00000479785 ARAP1Q96P48 1450 aa5.45□□□□□ -1.54
TRBV12-1-201ENST00000479785 PDS5BQ9NTI5 1447 aa5.44□□□□□ -1.54
TRBV12-1-201ENST00000479785 C1QBPQ07021 282 aaKnown RBP5.43□□□□□ -1.54
TRBV12-1-201ENST00000479785 RNF39Q9H2S5 420 aa5.42□□□□□ -1.54
TRBV12-1-201ENST00000479785 NCAPD3P42695 1498 aa5.41□□□□□ -1.54
TRBV12-1-201ENST00000479785 ERCC6L2Q5T890 1561 aa5.41□□□□□ -1.54
TRBV12-1-201ENST00000479785 MRC2Q9UBG0 1479 aa5.4□□□□□ -1.54
TRBV12-1-201ENST00000479785 FBLN2P98095 1184 aa5.4□□□□□ -1.54
TRBV12-1-201ENST00000479785 LAMC3Q9Y6N6 1575 aa5.39□□□□□ -1.55
TRBV12-1-201ENST00000479785 ZNF219Q9P2Y4 722 aaPredicted RBP5.38□□□□□ -1.55
TRBV12-1-201ENST00000479785 HECW2Q9P2P5 1572 aa5.37□□□□□ -1.55
TRBV12-1-201ENST00000479785 WDR62O43379 1518 aa5.36□□□□□ -1.55
TRBV12-1-201ENST00000479785 SYNJ2O15056 1496 aa5.33□□□□□ -1.56
TRBV12-1-201ENST00000479785 ATAD2BQ9ULI0 1458 aa5.33□□□□□ -1.56
TRBV12-1-201ENST00000479785 CAPN15O75808 1086 aa5.3□□□□□ -1.56
TRBV12-1-201ENST00000479785 RSF1Q96T23 1441 aaPredicted RBP5.29□□□□□ -1.56
TRBV12-1-201ENST00000479785 CHD1O14646 1710 aa5.28□□□□□ -1.56
TRBV12-1-201ENST00000479785 BAZ1BQ9UIG0 1483 aaKnown RBP5.28□□□□□ -1.56
TRBV12-1-201ENST00000479785 ZBTB12Q9Y330 459 aaPredicted RBP5.28□□□□□ -1.56
TRBV12-1-201ENST00000479785 HMGXB3Q12766 1538 aa5.28□□□□□ -1.56
TRBV12-1-201ENST00000479785 CEP164Q9UPV0 1460 aa5.27□□□□□ -1.57
TRBV12-1-201ENST00000479785 CADPSQ9ULU8 1353 aa5.27□□□□□ -1.57
TRBV12-1-201ENST00000479785 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
TRBV12-1-201ENST00000479785 SPATA31D1Q6ZQQ2 1576 aa5.25□□□□□ -1.57
TRBV12-1-201ENST00000479785 FAM69CQ0P6D2 419 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms