RNA–Protein interactions for RNA: ENST00000479256.1

RTKN-208, Transcript of rhotekin, humanhuman

TSL 5

Gene RTKN, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-208ENST00000479256 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
RTKN-208ENST00000479256 CCDC180Q9P1Z9 1646 aa34.24■■■■□ 3.07
RTKN-208ENST00000479256 ABCC9O60706 1549 aa33.94■■■■□ 3.02
RTKN-208ENST00000479256 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
RTKN-208ENST00000479256 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
RTKN-208ENST00000479256 NACADO15069 1562 aa32.29■■■□□ 2.76
RTKN-208ENST00000479256 ZCCHC6Q5VYS8 1495 aaKnown RBP32.17■■■□□ 2.74
RTKN-208ENST00000479256 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
RTKN-208ENST00000479256 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
RTKN-208ENST00000479256 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
RTKN-208ENST00000479256 UNC13AQ9UPW8 1703 aa31.63■■■□□ 2.65
RTKN-208ENST00000479256 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
RTKN-208ENST00000479256 BICRAQ9NZM4 1560 aa31.48■■■□□ 2.63
RTKN-208ENST00000479256 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
RTKN-208ENST00000479256 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
RTKN-208ENST00000479256 EIF4G1Q04637 1599 aaKnown RBP30.64■■■□□ 2.5
RTKN-208ENST00000479256 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
RTKN-208ENST00000479256 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
RTKN-208ENST00000479256 SMARCA4P51532 1647 aa30■■■□□ 2.39
RTKN-208ENST00000479256 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
RTKN-208ENST00000479256 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
RTKN-208ENST00000479256 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
RTKN-208ENST00000479256 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
RTKN-208ENST00000479256 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
RTKN-208ENST00000479256 BAZ1BQ9UIG0 1483 aaKnown RBP29.67■■■□□ 2.34
RTKN-208ENST00000479256 HMGXB3Q12766 1538 aa29.63■■■□□ 2.33
RTKN-208ENST00000479256 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
RTKN-208ENST00000479256 WIZO95785 1651 aa29.55■■■□□ 2.32
RTKN-208ENST00000479256 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.31
RTKN-208ENST00000479256 NESP48681 1621 aa29.35■■■□□ 2.29
RTKN-208ENST00000479256 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
RTKN-208ENST00000479256 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
RTKN-208ENST00000479256 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
RTKN-208ENST00000479256 LAMC3Q9Y6N6 1575 aa29.02■■■□□ 2.24
RTKN-208ENST00000479256 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
RTKN-208ENST00000479256 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
RTKN-208ENST00000479256 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
RTKN-208ENST00000479256 KIF21AQ7Z4S6 1674 aa28.85■■■□□ 2.21
RTKN-208ENST00000479256 CFTRP13569 1480 aa28.81■■■□□ 2.2
RTKN-208ENST00000479256 CUX2O14529 1486 aa28.78■■■□□ 2.2
RTKN-208ENST00000479256 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
RTKN-208ENST00000479256 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
RTKN-208ENST00000479256 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
RTKN-208ENST00000479256 MRC2Q9UBG0 1479 aa28.65■■■□□ 2.18
RTKN-208ENST00000479256 WDR62O43379 1518 aa28.5■■■□□ 2.15
RTKN-208ENST00000479256 URB2Q14146 1524 aaKnown RBP28.47■■■□□ 2.15
RTKN-208ENST00000479256 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
RTKN-208ENST00000479256 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
RTKN-208ENST00000479256 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
RTKN-208ENST00000479256 DNMBPQ6XZF7 1577 aa28.14■■■□□ 2.1
RTKN-208ENST00000479256 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
RTKN-208ENST00000479256 ZNF608Q9ULD9 1512 aaPredicted RBP28.07■■■□□ 2.08
RTKN-208ENST00000479256 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
RTKN-208ENST00000479256 CUX1P39880 1505 aa28.03■■■□□ 2.08
RTKN-208ENST00000479256 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
RTKN-208ENST00000479256 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
RTKN-208ENST00000479256 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.07
RTKN-208ENST00000479256 SOGA1O94964 1423 aa27.93■■■□□ 2.06
RTKN-208ENST00000479256 AQRO60306 1485 aaKnown RBP eCLIP27.91■■■□□ 2.061e-7■■■■□ 24.6
RTKN-208ENST00000479256 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.05
RTKN-208ENST00000479256 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
RTKN-208ENST00000479256 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
RTKN-208ENST00000479256 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
RTKN-208ENST00000479256 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
RTKN-208ENST00000479256 OSCARQ8IYS5 282 aa27.73■■■□□ 2.03
RTKN-208ENST00000479256 FBLN2P98095 1184 aa27.69■■■□□ 2.02
RTKN-208ENST00000479256 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
RTKN-208ENST00000479256 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
RTKN-208ENST00000479256 SNAPC4Q5SXM2 1469 aa27.59■■■□□ 2.01
RTKN-208ENST00000479256 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
RTKN-208ENST00000479256 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
RTKN-208ENST00000479256 GAPVD1Q14C86 1478 aa27.57■■■□□ 2
RTKN-208ENST00000479256 GRIN2BQ13224 1484 aa27.55■■■□□ 2
RTKN-208ENST00000479256 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
RTKN-208ENST00000479256 CHD1O14646 1710 aa27.48■■□□□ 1.99
RTKN-208ENST00000479256 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
RTKN-208ENST00000479256 MAGI1Q96QZ7 1491 aaPredicted RBP27.43■■□□□ 1.98
RTKN-208ENST00000479256 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
RTKN-208ENST00000479256 TRIM41Q8WV44 630 aa27.39■■□□□ 1.98
RTKN-208ENST00000479256 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
RTKN-208ENST00000479256 ADAMTS12P58397 1594 aa27.24■■□□□ 1.95
RTKN-208ENST00000479256 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
RTKN-208ENST00000479256 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
RTKN-208ENST00000479256 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
RTKN-208ENST00000479256 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
RTKN-208ENST00000479256 FHAD1B1AJZ9 1412 aa27.22■■□□□ 1.95
RTKN-208ENST00000479256 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
RTKN-208ENST00000479256 KIF27Q86VH2 1401 aa27.2■■□□□ 1.94
RTKN-208ENST00000479256 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
RTKN-208ENST00000479256 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
RTKN-208ENST00000479256 IGF1RP08069 1367 aa27.17■■□□□ 1.94
RTKN-208ENST00000479256 CYB5RLQ6IPT4 315 aa27.14■■□□□ 1.94
RTKN-208ENST00000479256 RUSC2Q8N2Y8 1516 aa27.1■■□□□ 1.93
RTKN-208ENST00000479256 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
RTKN-208ENST00000479256 NUP160Q12769 1436 aa27.07■■□□□ 1.92
RTKN-208ENST00000479256 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
RTKN-208ENST00000479256 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
RTKN-208ENST00000479256 ERCC6L2Q5T890 1561 aa26.95■■□□□ 1.9
RTKN-208ENST00000479256 CUL7Q14999 1698 aa26.92■■□□□ 1.9
RTKN-208ENST00000479256 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms