RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
GSDMB-209ENST00000479136 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
GSDMB-209ENST00000479136 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
GSDMB-209ENST00000479136 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
GSDMB-209ENST00000479136 ABCC9O60706 1549 aa19.9■□□□□ 0.78
GSDMB-209ENST00000479136 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
GSDMB-209ENST00000479136 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
GSDMB-209ENST00000479136 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
GSDMB-209ENST00000479136 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
GSDMB-209ENST00000479136 NACADO15069 1562 aa19.46■□□□□ 0.71
GSDMB-209ENST00000479136 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
GSDMB-209ENST00000479136 MYT1Q01538 1121 aa19.25■□□□□ 0.67
GSDMB-209ENST00000479136 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
GSDMB-209ENST00000479136 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
GSDMB-209ENST00000479136 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
GSDMB-209ENST00000479136 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.62e-7■■■□□ 15.8
GSDMB-209ENST00000479136 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
GSDMB-209ENST00000479136 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
GSDMB-209ENST00000479136 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
GSDMB-209ENST00000479136 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
GSDMB-209ENST00000479136 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
GSDMB-209ENST00000479136 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
GSDMB-209ENST00000479136 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
GSDMB-209ENST00000479136 WIZO95785 1651 aa18.32■□□□□ 0.52
GSDMB-209ENST00000479136 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
GSDMB-209ENST00000479136 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
GSDMB-209ENST00000479136 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
GSDMB-209ENST00000479136 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
GSDMB-209ENST00000479136 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
GSDMB-209ENST00000479136 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
GSDMB-209ENST00000479136 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
GSDMB-209ENST00000479136 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
GSDMB-209ENST00000479136 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
GSDMB-209ENST00000479136 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
GSDMB-209ENST00000479136 CHIC1Q5VXU3 224 aa17.9■□□□□ 0.46
GSDMB-209ENST00000479136 HRCP23327 699 aa17.88■□□□□ 0.45
GSDMB-209ENST00000479136 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
GSDMB-209ENST00000479136 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
GSDMB-209ENST00000479136 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
GSDMB-209ENST00000479136 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
GSDMB-209ENST00000479136 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
GSDMB-209ENST00000479136 CFTRP13569 1480 aa17.55■□□□□ 0.4
GSDMB-209ENST00000479136 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
GSDMB-209ENST00000479136 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
GSDMB-209ENST00000479136 APLP2Q06481 763 aa17.43■□□□□ 0.38
GSDMB-209ENST00000479136 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
GSDMB-209ENST00000479136 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
GSDMB-209ENST00000479136 NESP48681 1621 aa17.41■□□□□ 0.38
GSDMB-209ENST00000479136 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
GSDMB-209ENST00000479136 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
GSDMB-209ENST00000479136 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
GSDMB-209ENST00000479136 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
GSDMB-209ENST00000479136 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
GSDMB-209ENST00000479136 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
GSDMB-209ENST00000479136 CUX1P39880 1505 aa17.28■□□□□ 0.36
GSDMB-209ENST00000479136 BCL11AQ9H165 835 aa17.27■□□□□ 0.35
GSDMB-209ENST00000479136 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
GSDMB-209ENST00000479136 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
GSDMB-209ENST00000479136 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
GSDMB-209ENST00000479136 SOGA1O94964 1423 aa17.24■□□□□ 0.35
GSDMB-209ENST00000479136 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
GSDMB-209ENST00000479136 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
GSDMB-209ENST00000479136 EEA1Q15075 1411 aa17.18■□□□□ 0.34
GSDMB-209ENST00000479136 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
GSDMB-209ENST00000479136 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
GSDMB-209ENST00000479136 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
GSDMB-209ENST00000479136 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
GSDMB-209ENST00000479136 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
GSDMB-209ENST00000479136 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
GSDMB-209ENST00000479136 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
GSDMB-209ENST00000479136 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
GSDMB-209ENST00000479136 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
GSDMB-209ENST00000479136 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
GSDMB-209ENST00000479136 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
GSDMB-209ENST00000479136 CUX2O14529 1486 aa17.04■□□□□ 0.32
GSDMB-209ENST00000479136 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.32
GSDMB-209ENST00000479136 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
GSDMB-209ENST00000479136 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
GSDMB-209ENST00000479136 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
GSDMB-209ENST00000479136 GOLGA3Q08378 1498 aa16.96■□□□□ 0.3
GSDMB-209ENST00000479136 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
GSDMB-209ENST00000479136 WDR62O43379 1518 aa16.93■□□□□ 0.3
GSDMB-209ENST00000479136 KIF21BO75037 1637 aa16.91■□□□□ 0.3
GSDMB-209ENST00000479136 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
GSDMB-209ENST00000479136 IGF1RP08069 1367 aa16.89■□□□□ 0.29
GSDMB-209ENST00000479136 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
GSDMB-209ENST00000479136 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
GSDMB-209ENST00000479136 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
GSDMB-209ENST00000479136 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
GSDMB-209ENST00000479136 IFT140Q96RY7 1462 aa16.84■□□□□ 0.29
GSDMB-209ENST00000479136 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
GSDMB-209ENST00000479136 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
GSDMB-209ENST00000479136 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
GSDMB-209ENST00000479136 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
GSDMB-209ENST00000479136 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
GSDMB-209ENST00000479136 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
GSDMB-209ENST00000479136 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
GSDMB-209ENST00000479136 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
GSDMB-209ENST00000479136 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
GSDMB-209ENST00000479136 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms